Helicobacter pylori SJM180: HPSJM_05390
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Entry
HPSJM_05390 CDS
T01323
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpm
Helicobacter pylori SJM180
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpm03016
]
HPSJM_05390 (truA)
Enzymes [BR:
hpm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPSJM_05390 (truA)
Transfer RNA biogenesis [BR:
hpm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPSJM_05390 (truA)
Prokaryotic type
HPSJM_05390 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADO02646
LinkDB
All DBs
Position
1094400..1095128
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AA seq
242 aa
AA seq
DB search
MRCFKAIVAYDGAYFLGYAKQPNKLGVQDKIESALNALGIKSVVVAAGRTDKGVHANNQV
LSFHAPKHWNADKLFYYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKSLKTPFL
APYIACGDYGSLDLLNTALKQFTGKHDFSLFKKEGGATTNPNRIIFNAFAYKTSIMGHEC
VVFKIIGDAFLRSSVRLIIQACVQYSLEKITLAEIEMQIHNLKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaagccattgtggcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaacttggcgtgcaagacaaaatagaaagcgctttaaacgcattagggatt
aaaagcgttgtggttgcggctgggcgcacggataaaggcgtgcatgcgaacaaccaagtg
ctgtcttttcacgctccaaaacactggaacgctgataaattattttattatctagccccc
aaactcgctccgcatattgtcttaaaaaaactagaagaaaaaaactttcatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagagtttaaaaacgcctttttta
gcaccttatatcgcttgcggggattatggctcactagatttattaaacaccgctttaaag
caattcacaggcaagcatgatttttctttgtttaaaaaagaaggcggggctacaaccaat
cctaatcgcatcatttttaacgcttttgcttataaaacttctatcatggggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttacgctccagcgtgcgtttgatcattcaa
gcatgcgttcaatattccttagaaaaaatcacgctcgctgaaattgaaatgcaaatccat
aacctcaaagccactataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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