KEGG   Helicobacter pylori SJM180: HPSJM_05725
Entry
HPSJM_05725       CDS       T01323                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hpm  Helicobacter pylori SJM180
Pathway
hpm02024  Quorum sensing
hpm03060  Protein export
hpm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HPSJM_05725
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPSJM_05725
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HPSJM_05725
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpm02044]
    HPSJM_05725
Enzymes [BR:hpm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HPSJM_05725
Secretion system [BR:hpm02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HPSJM_05725
  Eukaryotic Sec-SRP protein
   HPSJM_05725
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_31 AAA_22 Zeta_toxin AAA_30 AAA_24 nSTAND3 AAA_17 SLFN-g3_helicase cobW NPHP3_N 6PF2K AAA_19 ArsA_ATPase AAA_14 AAA_16 APS_kinase ResIII Fer4_NifH T2SSE AAA_11 AAA AAA_33 KAP_NTPase NTPase_1 Thymidylate_kin ABC_tran ParA NACHT KTI12 AAA_5 AAA_18 TsaE ATP_bind_1 YqeC
Other DBs
NCBI-ProteinID: ADO02709
LinkDB
Position
complement(1155760..1157106)
AA seq 448 aa
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLNALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEILNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLS
KFDSDSKGGIALGIIYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIISLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASVLKDTDL
ESSLEVKKIKAMVNSMTKKERENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMH
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtttcaagcgttaagcgatgggtttaaaaacgcgctcaataaaatccgctttcaagat
gatgaaaaagcgctagatcgggcgttagatgaattgaaaaaaacgcttttaaaaaacgat
gtgcatcataaagtggctagagaattgctcaaaaaagtggaaagtcaaacgaaactcaat
ggcattggtaagcagcaatttttaaacgctttagaaaagagtttgttagaaattttaagc
gctaaagggagcagtggtttcactttcgctcaaacgccccccaccgtggttttaatggcc
ggtttgcaagggagcggtaagacaaccaccaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcttagcggcggtggagcaa
ttaaaggttttgggcgaacaggtgggcgtggaagtgttttacgaagaaaataaaagcgtg
aaagaaatcgctaacaacgctttaaaaagggctaaagaagcgcaatttgatgttttactc
gtggatagtgcggggcgtttagccattgataaagagcttatgcaagaattaaaggaagtt
aaagaaatcttaaacccccatgaagtgctgtatgtcgcagacgccttgagcgggcaagat
ggggtcaaaagcgcgaatacctttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgatagcgattctaaagggggtatcgctttaggcatcatttatcaattaggctta
cccttgcgttttattgggagcggggaaaaaatccctgatttagacgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattatctcgctcgctgaaaaaaccgcc
agcgttttaaaccccaatgaagccaaagatttgagcaaaaagctcaaaaaagggcaattc
actttcaatgactttttaaaccagattgaaaaagtgaaaaaattaggctctatgagttct
ctgatctctatgattccaggtttagggaatatggcaagcgtgctaaaagacacggattta
gaaagctctttagaagtgaaaaaaatcaaggccatggtcaattccatgaccaaaaaagag
cgagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagcggc
ttagaagtgtctgaaatcaatcgcatcatcaaacgctttgatcaagcgagcaaaatggcg
aaacgcttaaccaataaaaagggcattagcgatttgatgaatctaatgagtcaggctaaa
aatcaaacgccccctaaaatgcactaa

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