Helicobacter pylori SJM180: HPSJM_06210
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Entry
HPSJM_06210 CDS
T01323
Name
(GenBank) outer membrane protein HopU
KO
K15845
outer membrane protein HopZ
Organism
hpm
Helicobacter pylori SJM180
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
RmuC
MFMR_assoc
Motif
Other DBs
NCBI-ProteinID:
ADO02806
LinkDB
All DBs
Position
complement(1261270..1263408)
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AA seq
712 aa
AA seq
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MGYQIGEAAQMVKNTKGIQQLSDNYENLSKLLTRYSTLNTLIKLSADPSAVSGAINNLNA
GATGLLKEKTNSPAYQAVSLALNAAVGLWNTIGYAVMCGNGNGTGSGPGSVVFNGQPGQD
STSITCNRYESTGPGHSMSIDEFKKLNEAYQIIQQALKNQSGFPVLGENGTKVSVDYNYE
CKQNASINGGVNQFCQAKNGSGSSGSNGTNTQTTTQTTQDGVTITTTYGSNKATVKFSIT
NNAQELLNQAANIMQVLNTQCPLVRSTNNENAAGNGSPWGLSTYGNACTIFQQEFSQVTS
MIKNAQEIVAQSKIANANQKAEIANPSNFNPFTDAGFAQSMLKNARAQAEMFNLAEQVKK
NLEVMQNNNNVNESLAGFGKGMTNFVSAFLASCKDGGGTLPNQGVTSSTWGAGCAYVGET
ITALKNSIAHFGTQEQQIEQAENIADTLVNFKSRYNELGNTYNSITTALSNIPNAQSLQN
AVSKKNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVSSQTNNGAMNGIGI
QVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATN
FLGKNNKLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKLNVANFQFLFNMGVRMNLA
RSKKKGSDHVAQHGIELGVKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgggctatcaaatcggtgaagccgctcaaatggtaaaaaacaccaaaggcatccaacag
ctttcagacaactatgaaaacttgagcaagcttttaacccgatacagcaccctaaacacc
ttgatcaaattgtccgctgatccgagcgctgtcagtggtgcgatcaacaatttgaacgcg
ggtgcgacgggtttgctcaaagaaaaaaccaactcccccgcctatcaagccgtctctttg
gcattaaacgccgcggtggggttgtggaataccatcggatatgcggtcatgtgcgggaac
gggaacggcacagggagtgggcctggcagcgtggtctttaatggccaaccaggacaggat
tccacgagcattacttgcaaccggtatgaatcaactggtcctggtcacagcatgtctatt
gatgaattcaagaaactcaatgaagcctatcaaatcatccaacaagctttaaagaatcaa
agtgggtttcctgttttaggcgagaacggcacaaaagtgagtgttgattataattatgaa
tgcaaacagaatgccagtatcaacggcggtgtgaatcagttctgccaagctaaaaatggt
agcggtagtagcggtagcaatggcactaacacgcaaaccaccacgcaaaccacgcaagac
ggcgtaacgatcaccactacttatggtagtaacaaagccaccgtcaaatttagcatcacc
aataacgctcaagagttgttaaatcaagcggcaaacatcatgcaagtccttaacacgcaa
tgccctctcgtgcgatctacgaataacgaaaacgctgcgggtaatggtagtccatggggt
ttaagcacatacgggaatgcatgcacaatcttccaacaagaatttagccaggttactagc
atgatcaaaaacgcccaagaaatcgtcgcgcaaagcaagatcgctaacgctaaccaaaaa
gcagaaatagctaaccccagcaacttcaaccctttcacagacgctggctttgcgcaaagc
atgctcaaaaacgctagagcccaagcagagatgttcaatttagctgagcaagtgaaaaag
aacctggaagtcatgcaaaacaacaataacgttaatgagagtttagcaggatttgggaaa
ggaatgaccaattttgttagcgcctttttggcatcatgcaaggatgggggtgggacattg
cctaatcaaggggttacttctagcacttggggagccggttgcgcctatgtgggagagacg
ataaccgccctaaaaaacagcatcgctcactttggcactcaagagcagcaaatagagcaa
gcagaaaacatcgctgacactctagtgaatttcaaatcccgatacaatgaattgggcaac
acctataacagcatcactactgcgctctctaatatccctaacgcgcaaagcttgcaaaac
gcggtgagcaaaaagaataacccctatagcccccaaggcatagaaaccaattactacttg
aatcaaaattcttacaaccaaatccaaacgattaaccaagagctagggcgaaaccccttt
aggaaagtgggtattgtcagttctcaaaccaacaatggcgcgatgaatgggatcggcatt
caagtgggttacaaacaattctttgggcaaaaaaggaaatggggcgctaggtattacggc
ttttttgactacaaccatgcgttcatcaaatccagctttttcaactcggcttctgacgtg
tggacttatggttttggagcggacgctctttataacttcatcaacgataaagccaccaat
ttcttaggcaaaaacaacaagctctcagtagggctttttggtgggattgcgttagcgggc
acttcatggcttaattctgaatacgtgaacttagccaccgtgaataatgtctataacgct
aaactgaacgtggcgaacttccaattcttattcaacatgggggtgagaatgaatttagcc
agatctaagaaaaaaggcagcgatcatgtggctcagcatgggattgagttaggcgtgaaa
atccccaccatcaacacgaactactattctttcatgggggctgaactcaaatacagaagg
ctctatagcgtgtatttgaattacgtgttcgcttactaa
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