Helicobacter pylori SJM180: HPSJM_06235
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Entry
HPSJM_06235 CDS
T01323
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm03030
DNA replication
hpm03430
Mismatch repair
hpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPSJM_06235
03430 Mismatch repair
HPSJM_06235
03440 Homologous recombination
HPSJM_06235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpm03032
]
HPSJM_06235
03400 DNA repair and recombination proteins [BR:
hpm03400
]
HPSJM_06235
Enzymes [BR:
hpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPSJM_06235
DNA replication proteins [BR:
hpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPSJM_06235
DNA repair and recombination proteins [BR:
hpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPSJM_06235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DUF1877
Motif
Other DBs
NCBI-ProteinID:
ADO02811
UniProt:
E1Q103
LinkDB
All DBs
Position
complement(1265386..1266408)
Genome browser
AA seq
340 aa
AA seq
DB search
MYRKDLDHYLKQRLPKAVFLYGEFDFFIHYYIQTISALFKYNNPDTETSLFYASDYEKSQ
IATLLEQDSLFGGSSLVILKLDFALHKKFKENDINLFLKALERPSHNRLIIGLYNAKSDT
TKYKYTSDAIVKFFQKSPLKDEAICVRFFTPKTWESLKFLQERANALHLDISSHLLNALF
EINNEDLGVSFNDLDKLAVLNAPITLEDIQELSSNAGDMDLQKLILGLFLKKSVLDIYDY
LLKEGKKDADILRGLERYFYQLFLFFAHIKTTGLVDAKEVLGYAPPKEIAENYAKNALRL
KEAGYKRVFEIFRLWHIQSMQGQKELGFLYLTPIQKIINP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtaaagatttggaccattatttaaaacaacgactccctaaagcggtgtttttg
tatggggagtttgattttttcattcattattatattcaaacgattagcgcactttttaaa
tacaataaccctgacacagaaacttcgcttttttatgcgagcgattatgaaaaaagccaa
attgcgacccttttagagcaggattctttatttggagggagcagtttagtcattttaaaa
ctggattttgcactgcataagaaatttaaggaaaatgatatcaatctttttttaaaggct
ttagagcggcctagccataacaggcttatcatagggctttataatgctaaaagcgacacc
acaaaatacaaatacactagcgacgctatcgttaaatttttccaaaaaagccccttgaaa
gatgaagccatttgcgtacgcttttttacccctaaaacttgggagagtttgaaattctta
caagaaagggctaatgctttacatttagacattagcagccatcttttaaacgctcttttt
gaaattaataacgaggatttaggcgtttcgtttaacgatttagacaagctagcggtttta
aacgcgcccatcactttagaagacattcaagaattaagctccaatgcgggggatatggat
ttgcaaaagctcattttagggctttttttgaaaaaaagcgttcttgatatttatgattat
ttgttaaaagagggcaaaaaggatgcggatattttaagggggttagagcggtatttttac
cagctttttttatttttcgctcatattaaaacgaccggtttagtggacgctaaagaagtt
ttaggctacgctcctcctaaagagattgctgaaaattacgccaaaaacgccctgcgtttg
aaagaagccggctataagagggtttttgaaatttttaggttatggcacattcaaagcatg
caagggcaaaaggaattgggctttttgtatttgacccccattcaaaaaatcattaacccc
taa
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