Helicobacter pylori SJM180: HPSJM_06920
Help
Entry
HPSJM_06920 CDS
T01323
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpm
Helicobacter pylori SJM180
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpm03032
]
HPSJM_06920
03400 DNA repair and recombination proteins [BR:
hpm03400
]
HPSJM_06920
Enzymes [BR:
hpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPSJM_06920
DNA replication proteins [BR:
hpm03032
]
Prokaryotic type
DNA Topoisomerases
HPSJM_06920
DNA repair and recombination proteins [BR:
hpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPSJM_06920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF4364
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ADO02944
LinkDB
All DBs
Position
1390880..1392940
Genome browser
AA seq
686 aa
AA seq
DB search
MKDSIIIIESPNKVAKIKEITGASVFATIGHFMQLKSYDENNNFKPTFEYDPQKKKRIFE
IIEACKNKKVYIATDPDREGYAIGYHFYEKIKRIASSIYRAEFFEITPSGINKGLQNALL
FENTNKQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREI
EKFKALPENEKVSYQIQAKINDSANREVTIKHCDEKGEEIKFNDKEEALKLFESLKDNKA
CLLKDLKNSVVETKPKKPFITSTLLEKASSMLGLSISEVQSLAQNLFEAGLITYIRTDAE
SLSVEFLDETESFYAPIYKDLYLKREYKAGKQSQAEAHEAIRITHPHTTEDLESIVYNAN
ITNQDALKLYQLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSVKGLKSAGFLAMFSKK
ELENDESNDDKDNKEKEQNAQFNLKIDDVLSLNDLVLATIKRNAPSAYKEADFVKLLENK
GIGRPSTYASYLPTLLKRGYISISQDKKHTITPTHKGKRVVEVFENAYQFIIDLTYTKQM
EEVLDEIVENKSSYVDFINNLNSKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLNL
SEEFKNYKEDNRVAKAFLDRYIKEHEFFKKNNKKASSSNNDENRPATPKQISFAEILAKK
HNVKLPKGFKYSMKVCGDFINEYHKK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagcatcatcattattgaaagccctaataaagtggctaagattaaagaaatc
acaggagctagtgtttttgctaccatagggcattttatgcaactaaaaagctatgatgaa
aataataactttaagccgacttttgaatacgacccccaaaagaaaaagcgtatttttgag
ataatagaggcgtgtaaaaacaaaaaagtttatatcgctactgaccctgatagagagggt
tatgctataggctatcatttttatgaaaaaattaaaaggatagcaagttctatttataga
gcggagttttttgaaatcactccaagtgggattaacaagggcttacaaaacgccctttta
tttgaaaacaccaataagcaaatgtatcaaagcgctttagcaagacgagttgcagatatg
ctcttaggttttacgctatccccttatttaggtaaggctttaggacaaatgaaaggtagt
agtgctgggcgagtgcaaaccccttgtttaaaactcattgtagatagagacagagagatt
gaaaaatttaaggctttacctgaaaatgagaaagtaagctatcaaattcaagctaagatt
aacgatagtgctaacagagaagtaactatcaagcattgtgatgaaaagggcgaagagatt
aaattcaatgataaagaagaggctttaaaactctttgagagcttaaaggataataaagct
tgtcttttaaaggatttaaaaaactctgttgtagagactaaacctaaaaagccctttatc
acttctacgcttttagaaaaagcaagttctatgcttggtttaagtattagcgaagtgcaa
tcactagctcaaaatctctttgaggctggactgattacttacattaggacagatgcggaa
agtttgagcgtggagtttttagatgagacagagagcttttatgcacctatttataaggac
ttgtatttaaaaagagaatacaaggctggcaagcaaagccaagcagaagcccatgaagca
attcgcatcacacacccccatactactgaagatttagaaagcatagtctataatgctaat
attactaatcaagacgctttaaaactctatcaactcatttttgaaaggactattgaaagt
caaggcaagaatgccatttatgacaagcaagatttgctctttaaaatcaaaaacgagtat
tttaaatgttctgtaaagggtttaaaaagtgctggatttttagcaatgttttctaaaaaa
gagctagaaaatgatgaaagtaatgatgataaagacaataaagaaaaagaacaaaacgca
caatttaatctaaaaattgatgatgtgttaagtctaaatgacttagttttagccaccatt
aaaagaaatgccccaagtgcttataaagaggcagattttgtcaagcttttagaaaataaa
ggcataggcagacctagcacttatgcgagctatttgcctacgcttttaaaaagaggatac
atcagcattagccaagataaaaaacacactattacgcctacacataagggtaaaagagtg
gtagaagtgtttgaaaatgcttatcaatttattattgatttgacctacaccaagcaaatg
gaagaagtgctagatgagattgtagaaaataaaagctcttatgtggattttatcaacaat
ctaaattctaaatgccctaagattgaaaagctagaaagaaatgatgatgagataaaacct
agcagtgaaggacaaatcacttatatagaaaatattttaagagatttgcaattaaattta
agcgaagagtttaaaaactacaaagaagacaacagagtggctaaggcgtttttagaccga
tacattaaagagcatgagttttttaagaaaaacaacaaaaaggctagtagctctaataat
gatgaaaatagacccgctacgcctaaacaaattagctttgctgagatattagctaaaaag
cataatgtcaagctccccaaaggatttaaatatagtatgaaagtgtgtggggattttatc
aatgagtatcataagaagtag
DBGET
integrated database retrieval system
