Helicobacter pylori SJM180: HPSJM_08090
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Entry
HPSJM_08090 CDS
T01323
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm00550
Peptidoglycan biosynthesis
hpm01100
Metabolic pathways
hpm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPSJM_08090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPSJM_08090
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpm01011
]
HPSJM_08090
Enzymes [BR:
hpm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HPSJM_08090
Peptidoglycan biosynthesis and degradation proteins [BR:
hpm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HPSJM_08090
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
F-actin_cap_A
Motif
Other DBs
NCBI-ProteinID:
ADO03168
LinkDB
All DBs
Position
complement(1638386..1640152)
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AA seq
588 aa
AA seq
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MKNLRYKLLLFVFIGFWGLLVLNLFILSVKNQEYYEKLAERNMTKKEFLVPTRGDITDRN
HEFLATNELVFGVFLPSRLKQKELLEKIEVIQKFFPNFPKETLLNNYQKENSLYNHNLIK
VVGFIPYIAMQPLYAKLIQTQGIFVRPLDKRYYPNNALASHVLGYVGVASLQDLKDDEEN
QYSQIVGKTGIEKEYNKLLQGKVGYKIMRVNALNQELATLEVVPPSTNNHLQLSLDKRLQ
KEADKLFENKRGAILVMDTENGELLVAGSYPEYNLNDFVGGISQDKWQKLQDDIYNPLLN
RFANALYPPGSVVKMGVGLSFLENLHITENTTIPTPPFIEVGKRKFRDWKKTGHGNSNLY
KAIRESVDVYFYKFGLEISIEKLSKTLREVGFGEKTGVDLPNEFVGIVPDNLWKLKRFNQ
DWRVGDTLITAIGQGSFLATPLQVLAYTGLIATGKLATPHFAIHNQQPLKDPLNSFQKKK
LQALRVGMYEVCNHKDGTAYHSTRGSKVTLACKTGTAQVVEIAQNIVNRMKEKDMEYFHR
SHAWITAFLPYEKPKYAITILVEHGEGGSKLGGLLVKMSNKLYELGYL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttcgctataagcttttactctttgtttttatagggttttgggggttgttg
gttttaaatttatttattctaagcgttaaaaatcaagaatactatgaaaaattggctgaa
cgaaacatgactaaaaaggaatttttagtccctacaaggggtgatattacagacagaaac
catgaatttttagccactaacgaattggtgtttggcgtgtttttgcctagcagactgaaa
caaaaagaacttttagaaaaaattgaggtgattcaaaagtttttccctaattttcccaaa
gaaacgcttttaaacaattaccaaaaagaaaattcgctttataaccataacctcattaaa
gtggtgggattcattccttatatcgccatgcaacctctttatgccaaactcatccaaact
caaggcatttttgtgcgtcctttagacaagcgctactaccctaataacgctttagcttcg
catgttttaggctatgtgggggtggcaagcttgcaagatttaaaagacgatgaagagaat
caatacagccagattgtgggcaaaaccggcattgaaaaagaatacaacaagcttttgcaa
ggcaaggtgggctataaaatcatgcgcgtcaatgcgctcaatcaggaattagccacttta
gaagtagtgccgccaagcaccaacaaccacttgcaattaagtttagacaaacgcttgcaa
aaagaagcggacaagctctttgaaaataaaaggggggcgattttagtgatggatacagaa
aatggggaattgctcgttgcagggagttaccctgaatacaatttgaacgattttgtaggc
gggatcagtcaagacaaatggcaaaaacttcaagatgatatttataaccccttattaaac
cgcttcgctaacgccttgtatccgccgggatctgtggttaaaatgggcgtggggttaagc
tttttagaaaaccttcatatcacagaaaacaccaccatacccacaccgccttttattgaa
gtgggtaagcgcaaattcagggactggaaaaaaacagggcatggcaattccaatttgtat
aaagccattagggagtccgtggatgtgtatttttataagtttgggcttgaaatctctata
gaaaaactctctaaaaccttaagggaagtgggctttggggaaaaaacgggcgttgatttg
ccgaatgaatttgtggggattgtgccggataatttgtggaaactcaaacgcttcaatcaa
gattggcgcgttggggacacgctcattaccgctattgggcaaggctcttttttagccacg
cccttacaagtgctagcctatacgggactcattgcgacgggcaaactggcgacgcctcat
tttgctatccataaccaacagccgctcaaagatcccctgaatagctttcaaaaaaagaag
ctccaagccttgcgcgtgggcatgtatgaagtgtgcaaccataaagacggcacggcttat
cattccacaaggggttctaaggttactttagcgtgtaaaaccggcaccgcgcaagtcgtg
gaaatcgctcaaaacattgtcaatcgcatgaaagaaaaggatatggaatatttccatcga
tcccatgcgtggattaccgcattcttgccttatgaaaaacccaaatacgctatcactatt
ttagtagaacatggggaaggggggtcaaaactaggggggttgttagtgaaaatgagcaat
aaactctatgaacttggctatctttaa
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