KEGG   Helicobacter pylori India7: HPIN_00075
Entry
HPIN_00075        CDS       T01918                                 
Name
(GenBank) type IV secretion system protein VirB4
  KO
K12053  ComB4 competence protein
Organism
hpn  Helicobacter pylori India7
Brite
KEGG Orthology (KO) [BR:hpn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpn02044]
    HPIN_00075
Secretion system [BR:hpn02044]
 Type IV secretion system
  DNA uptake competence system protein
   HPIN_00075
SSDB
Motif
Pfam: CagE_TrbE_VirB TrwB_AAD_bind FtsK_SpoIIIE DUF87 AAA_29 nSTAND3 TraG-D_C RsgA_GTPase AAA_10 AAA_22 AAA_16 DUF5727 AAA_7 PduV-EutP AAA_23 T2SSE ABC_tran CbiA SMC_N
Other DBs
NCBI-ProteinID: ADU79275
UniProt: E8QD77
LinkDB
Position
14281..16644
AA seq 787 aa
MLEKLLSAIKQKVSNYFLGVLPKSYSMSEENNLLGLYDEHFLLTKNENLVGILRLEGVSY
THLSTEQLQDLFTERQMALDSLEKVVARLVVKRRKIDHQQNIQTDSQYLQAILNQFENKE
VYENQYFLVLESAHSLQGVLEHKKKSIMHANRENFKDILSYKAHFLQETLKSLEIQLKNY
APKLLSSKEVLNFYAEYINGFDLPLKPLVGGYLSDSYIASSITFEKDYFIQESFNQKTYN
RLIGIKAYESERITSIAIGALLYQETPLDIIFSIEPMSVNKTLSFLKERAKFSMSNLVKN
ELLEYQELVKTKRLSMQKFALNILIKAPSLENLDAQTSLVLGLLFKENLVGVIETFGLKG
GYFSFFPERIHLNHRLRFLTSKALACLMVFERQNLGFKANSWGNSPLSVFKNLDYSPFLF
NFHNQEVSHNNAKETARVNGHTLVIGATGSGKSTLISFLMMSALKYQNMRLLAFDRMQGL
YSFTKFFKGHYHDGQSFSINPFCLEPNLQNLEFLQSFFLSMFDLAPSRDKEALEDMNAIF
SAIKSLYETLYPKAFSLLDFKETLKRTSSNQLGLSLEPYLNNPLFNALNDAFNSNAFLNV
INLDTITQNPKDLGLLAYYLFYKILEESRKNDSGFLVFLDEFKSYVENDLLNAKINALIT
QARKANGVVVLALQDIYQLSGVKNAHSFLSNMGTLVLYPQKNARELKHHFNVPLSETEIS
FLENTPLYARQVLVKNLGNGNSNMIDVSLESLGRYLKIFNSDSSHVNKVKALQKDYPTEW
REKLLKS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgttagaaaagcttttgagcgctatcaaacaaaaagtttcaaactattttttaggggtt
ttgcctaaaagctattctatgagcgaagaaaacaaccttttaggcttgtatgatgagcat
ttcttgctcactaaaaacgaaaacttagtgggcatcctccgtttagaaggggtgagttac
acccatttaagcacagagcaattgcaagatcttttcaccgagcgccagatggcgttggat
tctttagaaaaagtcgtggcgcgcctggtggttaaaaggcgtaaaattgatcaccagcaa
aacattcaaactgactctcaatacttgcaagcgattttgaatcaatttgaaaacaaagaa
gtgtatgaaaatcagtattttttagttttagaaagcgcgcattctttgcagggcgtttta
gagcataagaaaaaatccataatgcatgccaatagggaaaattttaaggacattctctct
tataaagcgcattttttgcaagaaactttaaaaagtttagaaatccagctcaaaaactat
gcccccaaactcttaagctctaaagaggttttgaatttttatgcggaatacattaacggg
tttgacctccctttaaagcccctagtaggggggtatttgagcgacagctatatcgctagt
tctatcacttttgaaaaagattatttcattcaagaaagctttaatcaaaaaacctataac
cgcttgattggcattaaagcttatgagagcgagcgcatcacttctatagcgatcggagcg
cttttataccaagagacgccactagatattatcttttctatagagcctatgagcgtcaat
aaaacgctgagttttttaaaagaacgggccaaattcagcatgtccaatctcgttaaaaac
gagctattagaataccaagaactagtcaaaaccaaacgcctatccatgcaaaaattcgcc
ctaaacattcttatcaaagcccctagtttagagaatttagacgctcaaacaagcttagtt
ttagggcttttatttaaagaaaatttagtgggcgttatagaaacttttggcttgaagggg
gggtatttttcctttttccctgaacgcatccatttaaaccaccgcttgcgttttttaact
tctaaagccttagcgtgtttaatggtgtttgaaaggcaaaatttaggctttaaggctaat
tcatgggggaatagccctttgagcgtgtttaaaaacttggattattccccttttttattc
aatttccacaaccaagaagtgagccacaacaacgctaaagaaaccgctagagtgaatggg
catactttagtcataggggctactggaagcggtaaaagcacgctgattagctttttaatg
atgagcgctttgaaataccaaaacatgcgccttttagcttttgacaggatgcaagggctg
tattctttcacaaaattttttaaagggcattaccatgacggccaatcttttagcattaat
cccttttgtttagagcctaatttgcagaatttagaatttttgcaatccttctttttgagc
atgtttgatcttgccccttcaagggataaagaagctttagaagacatgaatgcgattttt
agcgcgattaagagcctttatgagaccttataccctaaagcttttagtttgctagacttt
aaagaaacgcttaaaagaacctcatctaaccaattgggcttgagtttagagccgtatttg
aataaccccctttttaacgctttgaatgacgcgttcaactccaacgcttttttaaatgtg
ataaacctagacaccatcacccaaaaccctaaagacttggggcttttagcctattatttg
ttttataaaatcttagaagaatccaggaaaaacgacagcggttttttggtttttttagac
gagtttaaatcctatgtggagaacgatttactgaacgctaaaattaacgctttaatcacg
caagcacgaaaggctaatggcgtggtggtgttggctttgcaagacatttaccaattgagc
ggggttaaaaacgctcatagttttttaagcaacatggggactcttgttttgtatccgcaa
aaaaacgctagggagttgaaacaccattttaatgtgcctttgagcgaaactgaaatttct
tttttagaaaacacccctttgtatgccaggcaggttttagtcaaaaatctgggtaatggg
aattctaacatgattgatgtgagtttggaaagtttggggcgttatttgaaaatctttaat
tcagactctagccatgtgaataaagtgaaagcgttacaaaaagactaccctacagagtgg
cgtgagaaacttttgaagagctaa

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