Helicobacter pylori India7: HPIN_01110
Help
Entry
HPIN_01110 CDS
T01918
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hpn
Helicobacter pylori India7
Pathway
hpn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPIN_01110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpn03019
]
HPIN_01110
03009 Ribosome biogenesis [BR:
hpn03009
]
HPIN_01110
Enzymes [BR:
hpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPIN_01110
Messenger RNA biogenesis [BR:
hpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPIN_01110
Ribosome biogenesis [BR:
hpn03009
]
Prokaryotic type
rRNA helicases
HPIN_01110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Cas3-like_C_2
UvrD-helicase
AAA_30
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ADU79478
UniProt:
E8QE90
LinkDB
All DBs
Position
216667..218145
Genome browser
AA seq
492 aa
AA seq
DB search
MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELFEIPIINENQIIKTLHDAKVSEAIISLYEQLTEIFEPS
QLVLKLLSLQFETTKIGLNQQEIDAIQNPKEKTPKPSNKKTHQHEPARSFKKGQHRDRHP
KTNHHSKKPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaatcaaccaccactccctacagaaattgatgatgacgcttatcataagcct
agttttaatgatttgggcttaaaagaatcggttttaaaatccgtttatgaagctggcttc
acttccccaagccccattcaagaaaaggccattccggctgttttacaaggtcgagatgtc
atcgcgcaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacaccatagaggccttagtgatcacgcccaccagagaattagcc
atgcaaattagcgatgagatttttaagttgggcaaacacaccaggactaaaaccgtgtgc
gtgtatggaggccagagcgttaaaaagcaatgcgaatttattaagaaaaacccccaagtg
atgatcgctacaccaggaagactgcttgatcacttaaagaatgaacgcatccataaattt
gtgcctaaagtggtcgttttagatgaaagcgatgaaatgctggatatggggtttttagac
gatattgaagagatttttgactacctccctagcgaagcgcagatcttgcttttttcagcc
acgatgccagagccgattaaaagactagcggataagattttagaaaaccctattaaaatc
catatcgctccttctaatatcactaacaccgacatcacccaacgcttttatgtgatcaat
gagcatgagagggctgaagcgatcatgcgccttttagacacccaagcgcccaaaaagagc
attgttttcacgcgcaccaaaaaagaagccgatgaattgcaccaattccttgcttctaaa
aactataaaagcaccgccttgcatggggatatggatcaaagggatcggcgcgcttctatc
atggcgtttaaaaaaaatgacgctgatgtgttggtggctaccgatgtggcgagccgtggg
ctagacatcagcggtgtaagccatgtgtttaattaccacttgcccctaaacaccgagagc
tatatccatcgcattgggagaaccgggcgagcgggtaaaaaaggcatggcgatcacttta
gtaacccctttagaatacaaagagcttttacgcatgcaaaaagaaattgattcagagatt
gaactttttgagatccccatcattaacgaaaatcagatcatcaaaaccttacatgacgct
aaagtgtctgaagcaatcatcagcctttatgaacagcttaccgaaatttttgagccgtct
caattggttttaaaacttttgagtttgcagtttgaaaccactaaaattggcttaaaccag
caagaaattgatgcgattcaaaaccctaaagaaaaaacgccaaaaccctctaacaaaaaa
acgcaccaacatgagccagcgcgttctttcaaaaagggtcagcatagagacagacaccct
aaaacaaaccaccattctaaaaaacccaaacgccgttaa
DBGET
integrated database retrieval system
