Helicobacter pylori India7: HPIN_03810
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Entry
HPIN_03810 CDS
T01918
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpn
Helicobacter pylori India7
Brite
KEGG Orthology (KO) [BR:
hpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpn03032
]
HPIN_03810
03400 DNA repair and recombination proteins [BR:
hpn03400
]
HPIN_03810
Enzymes [BR:
hpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPIN_03810
DNA replication proteins [BR:
hpn03032
]
Prokaryotic type
DNA Topoisomerases
HPIN_03810
DNA repair and recombination proteins [BR:
hpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPIN_03810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ADU79990
UniProt:
E8QG78
LinkDB
All DBs
Position
complement(771086..773149)
Genome browser
AA seq
687 aa
AA seq
DB search
MKDSVIIIESPNKVAKIKEITGAKVFATIGHFMQLKSYDENNNFKPTFEYDPQKKKRIFE
IIEACKNKKVYIATDPDREGYAIGYHFYEKIKKIASSIYRAEFFEITPSGINKGLQNALL
FENTNKQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREI
EKFKALPENEKVSYQIQAKINDNANREVIIKHCDEKGEEIKFNDKEEALKLFESLEDNKA
CLLKDLKTSVVETKPKKPFITSTLLERASSELGLGIAEVQSLAQSLFEAGLITYIRTDAE
SLSVEFLNEAESFYLPIYKEVYQKREYKAGKQSQAEAHEAIRITHLHKYEDLESIVYNAG
ITNQDALKLYRLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSAKSLKSAGFLAMFSKK
ELENDDESNDDKEDKEKEQNAQFNLKIDDMLSLNDLVLATIKRNAPSPYKEAGFVKLLEN
KGIGRPSTYASYLPTLLKREYISISQDKKHTITPTHKGKRVVEVFENAYQFIIDLTYTKQ
MEEVLDEIIENKSSYLDFLQNLATKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLD
LSEEFKNYKEDNRIAKAFLDRYIKEHEFFEKNNKKASSSNNNEIRPATPKQINFAEMLAK
KHNVKLPKGFKYSMKVCGDFINEYHKK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagcgttattattattgaaagccctaataaagtggctaagattaaagaaatc
acaggagcaaaggtctttgctaccatagggcattttatgcaacttaaaagctatgatgaa
aacaataactttaagccgacctttgaatacgacccacaaaagaaaaaacgtatttttgag
ataatagaggcatgtaaaaataaaaaggtttatattgctactgaccctgatagagagggt
tatgctataggctatcatttttatgaaaagattaaaaaaatagctagttctatttataga
gcggagttttttgaaatcacaccaagtgggattaacaaaggcttacaaaatgctctttta
tttgaaaacactaataagcaaatgtatcaaagtgccttagctagaagagtggctgatatg
cttttaggttttacgctctccccttatttaggcaaagctttagggcaaatgaaaggctct
agtgctggaagagtgcaaacgccttgcttaaagcttattgtagatagagacagagagatt
gaaaaatttaaggctttaccagaaaatgaaaaagtaagctatcaaatccaagctaagatt
aacgacaatgctaatagagaagtcatcattaagcattgtgatgaaaagggcgaagagatt
aaattcaatgataaagaagaggctttaaaactctttgaaagcttggaagacaataaagca
tgtcttttaaaagatttaaaaacctctgttgtagagaccaaacctaaaaagccctttatc
acttctacgcttttagaaagagcgagttctgagttaggtttaggtatcgctgaagtgcaa
tctttagctcaaagtctctttgaggctggactaattacttacattagaacagatgctgaa
agtttgagcgtagagtttttaaatgaggcagagagcttttatttgcctatttataaagaa
gtgtatcaaaaaagagaatacaaggctggtaagcaaagccaagcagaagctcatgaagcc
attcgtatcacgcacctccacaaatacgaagatttagaaagcatagtctataatgctggt
atcactaatcaagacgctttaaaactctatagattgatttttgaaagaaccattgaaagt
caaggcaagaatgccatttatgacaagcaagatttgctctttaaaatcaaaaatgagtat
tttaaatgttctgctaagagtttaaaaagcgctgggtttttagcaatgttttctaaaaaa
gagctagagaatgatgatgaaagtaatgatgacaaagaagataaagaaaaagagcaaaac
gcacaatttaatcttaaaattgatgatatgttaagtctaaatgacttagttttagctacc
attaaaagaaatgccccaagcccttataaagaggcaggttttgtcaagcttttagaaaat
aaaggcataggaagacctagcacttatgcgagttacttgcctactcttttaaaaagagaa
tatattagcattagccaagataaaaagcacaccattactcctacgcataagggtaaaaga
gtggtagaagtgtttgaaaatgcttatcaattcattattgatttgacctacaccaaacaa
atggaagaagtgctagatgagattatagaaaataaaagctcatacttagattttttacaa
aatttagccactaaatgccctaagattgaaaaactagaaagaaatgatgatgagataaag
cctagtagtgaggggcaaatcacttatatagaaaacattttaagagatttgcaattagac
ttgagcgaagagtttaaaaactacaaagaagataatagaatagctaaggcatttttagac
agatacattaaagagcatgagttttttgagaaaaataataaaaaagctagtagctctaat
aataatgagattagacctgcgacacctaaacaaattaactttgctgagatgttagctaaa
aagcataatgtcaagctccccaaaggatttaaatatagtatgaaagtgtgtggggatttt
atcaatgagtatcataagaagtag
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