Helicobacter pylori India7: HPIN_04145
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Entry
HPIN_04145 CDS
T01918
Name
(GenBank) cytotoxin-associated protein A
KO
K15842
cytotoxicity-associated immunodominant antigen
Organism
hpn
Helicobacter pylori India7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CagA_N
CagA
Motif
Other DBs
NCBI-ProteinID:
ADU80055
UniProt:
E8QGE3
LinkDB
All DBs
Position
complement(837722..841366)
Genome browser
AA seq
1214 aa
AA seq
DB search
MTNETINQQPQAEAAFNPRQFINNLQVAFLKVDNAVASYDPDQKPIVDKNDRDNRQAFDG
ISQLREEYSNKAIKNPTKKNQYFSDFINKSNDLINKDALIDVESSTKSFQKFGDQRYRIF
TSWVSHQNDPSKINTRSIRNFMENIIQPPISDDKEKAEFLKSAKQSFAGIIIGNQIRTDQ
KFMGVFDESLKERQEAEKNGGPTGGDWLDIFLSFIFDKKQSSDVKEAINQEPVPHVQPDI
ATTTTDIQGLPPEARDLLDERGNFSKFTLGDMEMLDVEGVADIDPNYKFNQLLIHNNALS
SVLMGSHNGIEPEKVSLLYGDNGGPGARHDWNATVGYKDQQGNNVATIINVHMKNGSGLV
IAGGEKGINNPSFYLYKEDQLTGSQRALSQEEIRNKIDFMEFLAQNNAKLDNLSEKEKEK
FRTEIKDFQKDSKAYLDALGNDRIAFVSKKDTKYSALITGFGNGDLSYTLKDYGKKADKA
LDREAKITLQGSLKHDGVMFVDYSNFKYTNASKNPNKGVGVTNGVSHLEAGFNKVAVFNL
PNLNNLAITNFIRRDLEDKLIAKGLSPQEANKIIKDFLSNNKELVGKVSNFNKAVAEAKN
TGNYDEVKKAQKDLEKSLKKRGHLEKDVAKNLESKSSNKNKMEAKSQANSQKDEIFALIN
KEANREARAAAYTQNLKDIKRELSDKLENVNKNLKDFSKSFDEFKNGKNKDFSKAEETLK
ALKGSVKDLGINPEWISKVENLNAALNEFKNGKNKDFSKVTQAKSDLENSVKDVIINQKI
TDKVDNLNQAVSVAKATGDFSRVEQALADLKNFSKEQLAQQAQKNEDFNTGKKSEIYQSV
KNGVNGTLVGNGLSQAEATTLSKNFSDIKKELKAKLGNFNNNNNGLKNEPIYAKVNKKKA
GQAASLEEPIYAQVAKKVNAKIDRLNQIASGLGNVGQAAGFPLKKHDKVDDLSKVGLSAS
PEPIYATIDDLGGPFPLKKHDKVDDLSKVGLSASPEPIYATIDDLGGPFPLKRHDKVDDL
SKVGLSRNQELAQKIDNLNQAVSEAKAGFFGNLEQTIDKLKDSAKHNPMNLWVESAKQVP
ASLSAKLDNYATNSHTRISSNIKNGAINEKATGMLTQKNPEWLKLVNDKIVAHNVGSVSL
SEYDKIGFNQKNMKDYSDSFKFSTKLNNAAKDIKSGFTQFLTNIFSTASYYCLAGENAEH
GIKNANTKGGFQKS
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgaaaccattaaccaacaaccacaagccgaagcggcttttaacccgcggcaa
tttatcaataatcttcaagtagcttttcttaaagttgataacgctgtcgcttcatacgat
cctgatcaaaaaccaatcgttgataagaacgatagggataacaggcaagcttttgatgga
atctcgcaattaagggaagaatactccaataaagcgatcaaaaatcctaccaaaaagaat
cagtatttttcagactttatcaataagagcaatgatttaatcaacaaagacgctctcatt
gatgtagaatcttccacaaagagctttcagaaatttggggatcagcgttaccgaattttc
acaagttgggtgtcccatcaaaacgatccgtctaaaatcaacacccgatcgatccgaaat
tttatggaaaatatcatacaaccccctatctctgatgacaaagaaaaagcggagtttttg
aaatctgccaaacaatcttttgcaggaatcattatagggaatcaaatccgaacggatcaa
aagttcatgggcgtgtttgatgagtccttgaaagaaaggcaagaagcagaaaaaaatgga
gggcctactggtggggattggttggatatttttttatcatttatatttgacaaaaaacaa
tcttctgatgtcaaagaagcaatcaatcaagaaccagttccccatgtccaaccagatata
gccactaccaccaccgacatacaaggcttaccgcctgaagctagggatttgcttgatgaa
aggggtaatttttctaaattcactcttggtgatatggaaatgttagatgttgagggagtc
gccgacattgatcctaattacaagttcaaccaattattgattcacaataacgctctgtct
tctgtgttaatggggagtcataatggcatagaacctgaaaaagtttcattgttgtatggg
gacaatggtggtcctggagctagacacgattggaacgccaccgttggttataaagaccaa
caaggtaacaatgtggctacaataattaatgtgcatatgaaaaacggcagtggcttagtc
atagcaggtggtgagaaagggattaacaaccctagtttttatctctacaaagaagaccaa
ctcacaggctcacaacgagcattaagtcaagaagagatccgaaacaaaatagatttcatg
gaatttcttgcacaaaataatgctaaattagacaacttgagcgagaaagagaaggaaaaa
ttccgaactgagattaaagatttccaaaaagactctaaggcttatttagacgccctaggg
aatgatcgtattgcttttgtttctaaaaaagacacaaaatattcagctttaattactggg
tttggtaatggggatttgagctacactctcaaagattatgggaaaaaagcagataaagct
ttagatagggaggcaaaaatcactcttcaaggtagcctaaaacatgatggcgtgatgttt
gttgattattctaatttcaaatacaccaacgcctccaagaatcccaataagggtgtaggc
gttacgaatggcgtttcccatttagaagcaggctttaacaaggtagctgtctttaatttg
cctaatttgaataatctcgctatcactaattttataaggcgggatttagaggataaacta
atcgctaaaggattgtccccacaagaagctaataagatcatcaaagactttttgagcaac
aacaaagaattggttggaaaagtttcaaacttcaataaagctgtagctgaagctaaaaac
acaggcaattatgacgaagtgaaaaaagctcagaaagatcttgaaaaatctctaaagaaa
cgagggcatttggagaaagatgtagcgaaaaatttggagagcaaaagcagcaacaaaaac
aaaatggaagcgaaatctcaagctaacagccaaaaagatgagatttttgcgttgattaat
aaagaggctaatagggaagcaagagctgccgcttacactcagaatcttaaagacatcaaa
agggaattgtctgataaacttgaaaatgtcaacaagaatttgaaagactttagtaaatct
tttgatgaattcaaaaatggcaaaaataaggatttcagcaaggcagaagaaacgctaaaa
gcccttaaaggctcggtgaaagatttaggcatcaatccagaatggatttcaaaagttgaa
aatcttaatgcagctttgaatgaattcaaaaatggcaaaaataaggatttcagcaaggta
acccaagcaaaaagcgaccttgaaaattccgttaaagatgtgatcatcaatcaaaagata
acggataaagttgacaatctcaatcaagcggtatcagtggctaaagcaacgggcgatttc
agtagggtagagcaagcgttagccgatctcaaaaacttctcaaaggagcaattggctcaa
caagctcaaaaaaatgaagatttcaatactggaaaaaaatctgaaatataccaatccgtt
aagaatggtgtgaatggaaccctagtcggtaatgggctatctcaagcagaagccacaact
ctttctaaaaacttttcggacatcaagaaagagttgaaagcaaaacttgggaatttcaat
aacaacaataatggactcaaaaacgaacccatttacgctaaagttaataaaaagaaagca
gggcaagcagctagccttgaagaacccatttacgctcaagttgctaaaaaggtgaatgca
aaaattgaccgactcaatcaaatagcaagtggtttgggtaatgtagggcaagcagcgggc
ttccctttgaaaaagcatgataaagttgatgatctcagtaaggtagggctttcagctagc
cctgaacccatttacgctacgattgatgatctcggcggacctttccctttgaaaaagcat
gataaagttgatgatctcagtaaggtagggctttcagctagccctgaacccatttacgct
acgattgatgatctcggcggacctttccctttgaaaaggcatgataaagttgatgatctc
agtaaggtagggctttcaaggaatcaagaattggctcagaaaattgacaatctcaatcaa
gcggtatcagaagctaaagcaggtttttttggcaatctagagcaaacgatagacaagctc
aaagattctgcaaaacacaatcccatgaatctatgggttgaaagcgcgaaacaagtacct
gctagtttgtcagcgaaactagacaattacgctactaacagtcacacacgcattagtagc
aatatcaaaaatggagcaatcaatgaaaaagcgaccggcatgctaacgcaaaaaaaccct
gagtggctcaagctcgtgaatgataagatagttgcgcataatgtgggaagcgtttctttg
tcagagtatgataaaattggcttcaaccagaagaatatgaaagattattctgattcgttc
aagttttccaccaagttgaacaatgccgcaaaagacattaagtctggctttacgcaattt
ttaaccaatatattttctacagcatcttattactgcttggcgggagaaaatgcagagcat
ggaatcaagaatgctaatacaaaaggtggtttccaaaaatcttaa
DBGET
integrated database retrieval system
