Helicobacter pylori 35A: HMPREF4655_20080
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Entry
HMPREF4655_20080 CDS
T01892
Name
(GenBank) putative exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HMPREF4655_20080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpo03400
]
HMPREF4655_20080
Enzymes [BR:
hpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HMPREF4655_20080
DNA repair and recombination proteins [BR:
hpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HMPREF4655_20080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
LCD1
KASH_CCD
RepD-like_N
Motif
Other DBs
NCBI-ProteinID:
ADU40250
LinkDB
All DBs
Position
complement(72101..72370)
Genome browser
AA seq
89 aa
AA seq
DB search
MQDELFETEKAPQKNTKNTKNTKNTPKKSFEEHVYSLEQAIDRLNDSNLSLKDGMDLYKT
AIQELFLAQKLLENAYLEYEKLQAPDKKA
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatgaattatttgaaaccgaaaaagccccccaaaaaaacactaaaaacaccaaa
aacactaaaaacacccctaaaaaaagctttgaagagcatgtttattccctagagcaagcc
atagatcgcttgaatgattctaatttgtccttaaaagacgggatggatttgtataaaacg
gccatacaagagttgtttttggctcaaaagcttttagaaaacgcttatttagagtatgaa
aaactccaagcacccgacaaaaaggcttaa
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