Helicobacter pylori 35A: HMPREF4655_20111
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Entry
HMPREF4655_20111 CDS
T01892
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
hpo
Helicobacter pylori 35A
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpo03021
]
HMPREF4655_20111 (nusA)
03009 Ribosome biogenesis [BR:
hpo03009
]
HMPREF4655_20111 (nusA)
Transcription machinery [BR:
hpo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HMPREF4655_20111 (nusA)
Ribosome biogenesis [BR:
hpo03009
]
Prokaryotic type
rRNA transcription factors
HMPREF4655_20111 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_NusA_C
DUF2777
S1
Cyt_b-c1_8
OB_RNR_2nd
Motif
Other DBs
NCBI-ProteinID:
ADU40281
LinkDB
All DBs
Position
104340..105527
Genome browser
AA seq
395 aa
AA seq
DB search
MEKISDLIECIAYEKNLPKEMISKVIQGCLLKMAQNELDPLARYLVIEENKQLQLIQLVE
VLEDDDERLINDPSKYISLSKAKEMDPSVKIKDELSYSLSLESMKQGAINRLFKDLQYQL
EKALEDSHFEAFQKRLNSVLMGQVILVDNHQNTFIEIEQQFQGVLSMRHRIKGESFKVGD
SIKAVLTQVKRTKKGLLLELSRTTPKMLEALLELEVPEIKDKEIEIIHCARIPGNRAKVS
FFSHNARIDPIGAAVGVKGVRINAISNELNKENIDCIEYSNVPEIYITLALAPAKILSVE
IKKIPIEELSAEEKESIQERFIVNNHLQKAKVRLLDIEKSKAIGKGGVNVCLASMLTGYH
IEFETIPSVKENAENESEKETQKVGVEALESLFKN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatcagcgatcttatagaatgcattgcgtatgaaaaaaatttgcctaaagag
atgatttcaaaagtgattcaaggctgtttgttaaaaatggcgcaaaatgagttagacccc
ctagcgcgctacttggtaattgaagaaaacaagcagctccagcttatccaattggtagaa
gttttagaagatgatgatgaaagattgattaacgacccttctaaatacatcagcttgtct
aaagccaaagaaatggatccaagcgttaagattaaagacgaattgtcttacagcttgagt
ttggagagcatgaagcaaggagcgatcaaccgcctttttaaagatctgcaataccagtta
gaaaaagcgttagaagacagccactttgaagcgtttcaaaagcgtcttaacagcgtttta
atggggcaagtgattttagtggataaccatcaaaacacttttattgagattgagcagcaa
tttcaaggcgtcctttccatgcgccatcgcatcaagggcgagagttttaaagtaggcgat
agcattaaagcggttttaacgcaagtcaaacgcacgaaaaaaggcttactattagagctg
agccgcaccacccctaaaatgcttgaagctttgttggaattagaagtccctgaaattaaa
gataaagaaattgaaatcatccattgcgcgcgaatcccaggcaacagagcgaaagtgagc
tttttttcccataacgctaggattgatcccataggtgcggctgtgggggttaagggcgtg
cgcattaatgcgatcagtaacgaattgaataaagaaaatattgattgcatagagtattct
aatgtgcctgaaatttacatcaccctcgcgctcgctccagccaaaattttaagcgttgaa
attaaaaaaatccctatagaagaattgagcgctgaagaaaaagaatccattcaagagcgt
tttattgtcaataaccatttgcaaaaggctaaagtgcgtttattagacattgaaaaatct
aaggctatcggtaaaggcggggtgaatgtgtgcttagcgtccatgcttacaggctatcac
atagagtttgaaaccattcctagcgtcaaagaaaacgcagaaaatgaaagcgaaaaagaa
acgcaaaaagtaggggtagaggctttagagtctttgtttaagaattaa
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