Helicobacter pylori 35A: HMPREF4655_20193
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Entry
HMPREF4655_20193 CDS
T01892
Name
(GenBank) transglycosylase SLT domain protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hpo
Helicobacter pylori 35A
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpo01011
]
HMPREF4655_20193
Enzymes [BR:
hpo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HMPREF4655_20193
Peptidoglycan biosynthesis and degradation proteins [BR:
hpo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HMPREF4655_20193
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
HTH_Mga
SLT_2
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
ADU40359
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All DBs
Position
complement(191466..192584)
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AA seq
372 aa
AA seq
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MPKRMKCFSQKWLVFFVTLLLASLGHAKMAFESNIDTKALESFGVNAGFLSQMPNALKKM
NKEEEWKKLVKRFDVNYQFIPIIKNMLIEASVPQEFLFLAMAESKFSSRAYSRKKAVGIW
QFMPSTAKELGLKVNHYIDERRDPIKSTQAAITYLKRLYKQTGEWYLVAMAYNYGLRKVQ
NAIKAAGTSDIKILLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVS
LVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNVLPSKDPTYTIYIPYEKLALFKQR
QLKQNKNIQASPKNPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLII
PTNKKLLATREF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagagaatgaagtgttttagtcaaaaatggttggttttttttgttaccctttta
ttggcttctttaggtcatgcgaaaatggcttttgaatctaatattgacaccaaagcgtta
gagtcttttggggttaatgcgggctttttatcccaaatgccaaacgctttaaaaaaaatg
aataaagaagaagaatggaaaaagttagtcaaaagatttgatgtgaattaccagttcatc
cccatcattaaaaacatgttaatagaagcgagcgtgccgcaagaatttttatttttagcc
atggcagagtctaaattttcatcaagggcttatagcaggaaaaaagcggtagggatttgg
caattcatgccaagcacggccaaagaattagggcttaaggtcaatcattacattgatgaa
aggagagatcccattaaaagcactcaagcagcgatcacttacttgaaacggctttacaag
caaaccggggagtggtatttggtcgctatggcgtataattacggcttgcgcaaggttcaa
aacgccattaaagccgccggcacttcggacattaagattttgttagatgaagataaaaaa
tacctccccaaagaaacacgagagtatatccgctccattctaagcctggcgttaaaattt
aacagcctagacaacctcaaagataaagaatatctgctcaatcgtggggcgagggtgagt
ttagtgggcgtcccgtttaaaaggcacacttctttagtccaagtggctaaaaatttaaac
ttgagtttagaaaccttaaaatcctacaaccaccaattccgttataatgttctgccttct
aaagaccccacctacaccatttatatcccttatgaaaaactcgctcttttcaaacaacgc
cagctcaaacaaaataaaaacattcaagccagtccaaaaaacccttttatcacccatgtg
gtcttgcctaaagaaaccttatcttctatcgctaaacgctatcaagtcagcatttccagt
atccaattagccaataacctcaaagattctaatatttttatccaccagcgcttaatcatc
cccaccaacaaaaaattactcgctacaagggaattttaa
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