Helicobacter pylori 35A: HMPREF4655_20214
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Entry
HMPREF4655_20214 CDS
T01892
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF4655_20214 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpo03019
]
HMPREF4655_20214 (groL)
03110 Chaperones and folding catalysts [BR:
hpo03110
]
HMPREF4655_20214 (groL)
03029 Mitochondrial biogenesis [BR:
hpo03029
]
HMPREF4655_20214 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpo04147
]
HMPREF4655_20214 (groL)
Enzymes [BR:
hpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HMPREF4655_20214 (groL)
Messenger RNA biogenesis [BR:
hpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HMPREF4655_20214 (groL)
Chaperones and folding catalysts [BR:
hpo03110
]
Heat shock proteins
HSP60 / Chaperonin
HMPREF4655_20214 (groL)
Mitochondrial biogenesis [BR:
hpo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HMPREF4655_20214 (groL)
Exosome [BR:
hpo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HMPREF4655_20214 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HMPREF4655_20214 (groL)
Exosomal proteins of breast cancer cells
HMPREF4655_20214 (groL)
Exosomal proteins of colorectal cancer cells
HMPREF4655_20214 (groL)
Exosomal proteins of bladder cancer cells
HMPREF4655_20214 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADU40380
LinkDB
All DBs
Position
complement(212261..213901)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVI
SEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaatcaaattttcagatagtgcaagaaaccttttatttgaaggcgtgaga
caactccatgacgctgtcaaagtaaccatggggccaagaggcaggaatgtgttgatccaa
aaaagctatggcgctccaagcatcaccaaagacggcgtgagcgtggctaaagagattgaa
ttaagttgcccggtggctaacatgggcgctcaactcgttaaagaagtagcgagcaaaacc
gctgatgctgccggcgatggcacgaccacagcgaccgtgcttgcttatagcatttttaaa
gaaggcttgagaaatatcacagctggggctaaccctattgaagtgaaacgaggcatggat
aaagccgctgaggccattattaatgagcttaaaaaagcgagcaaaaaagtaggcggtaaa
gaagaaatcacccaagtagcgaccatttctgcaaactccgatcacaatatcgggaaactc
atcgctgacgctatggaaaaagtgggtaaagacggcgtgatcaccgttgaagaagctaag
ggcattgaagatgaattagatgtcgtagagggcatgcaatttgatagaggctacctctcc
ccttactttgtaacaaacgctgagaaaatgaccgctcaattggataacgcttacatcctt
ttaacggataaaaaaatctctagcatgaaagacattctcccgctactagaaaaaaccatg
aaagaaggcaaaccgcttttaatcatcgctgaagacattgagggcgaagctttaacgact
ttagtggtgaataaattaagaggcgtgttgaatatcgcagcggttaaagctccaggcttt
ggggacagaagaaaagaaatgctcaaagacatcgctgttttaaccggcggtcaagttatt
agcgaagaattaggcttgactttagaaaacgctgaagtggagtttttaggcaaagccgga
aggattgtgattgacaaagacaacaccacgatcgtagatggcaaaggccatagccatgat
gtcaaagatagagtcgcgcaaatcaaaacccaaattgcaagcacgacaagcgattatgac
aaagaaaaattgcaagaaagattggctaaactctctggcggtgtggctgtgattaaagtg
ggcgctgcgagtgaagtggaaatgaaagagaaaaaagaccgggttgatgacgcgttgagt
gcgactaaagcggctgttgaagaaggcattgttattggcggcggtgcggctctcattcgt
gcggctcaaaaagtgcatttgaatttacacgatgatgaaaaagtgggctatgaaatcatc
atgcgcgccattaaagccccattagctcaaatcgctatcaatgccggttatgatggcggt
gtggtcgtgaatgaagtgcaaaaacacgaagggcattttggttttaacgctagcaatggc
aagtatgtggatatgtttaaagaaggcattattgaccccttaaaagtggaaaggatcgct
ttacaaaatgcggtttcggtttcaagcctgcttttaaccacagaagccaccgtgcatgaa
atcaaagaagaaaaagcaaccccagcaatgcctgatatgggtggcatgggcggtatggga
ggcatgggcggcatgatgtaa
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