Helicobacter pylori 35A: HMPREF4655_20425
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Entry
HMPREF4655_20425 CDS
T01892
Symbol
glyA
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo00260
Glycine, serine and threonine metabolism
hpo00460
Cyanoamino acid metabolism
hpo00630
Glyoxylate and dicarboxylate metabolism
hpo00670
One carbon pool by folate
hpo00680
Methane metabolism
hpo01100
Metabolic pathways
hpo01110
Biosynthesis of secondary metabolites
hpo01120
Microbial metabolism in diverse environments
hpo01200
Carbon metabolism
hpo01230
Biosynthesis of amino acids
hpo01240
Biosynthesis of cofactors
hpo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HMPREF4655_20425 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HMPREF4655_20425 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HMPREF4655_20425 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HMPREF4655_20425 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HMPREF4655_20425 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HMPREF4655_20425 (glyA)
Enzymes [BR:
hpo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HMPREF4655_20425 (glyA)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
HrcA
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADU40564
LinkDB
All DBs
Position
411288..412538
Genome browser
AA seq
416 aa
AA seq
DB search
MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCRFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVTGEHANPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALQEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaacgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagcgttttaacgaataaatacgctgaaggctatcctaacaagcgc
tactatggaggctgtgaagtggtggataaaatagaaagcttggccatagaaagggctaaa
aagctttttaattgccggttcgccaatgtgcaagcgcactcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaaaattttaggcatggatttaagctgt
ggggggcatttaacgcatggtgctaaagtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttggatggttatattgattatgaagaagcgctaaaaatcgctcaa
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggagcgttactattaggcgatatagcccat
gtggcagggcttgtggtaaccggtgagcatgctaatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaaccaatgat
gaagagatagcggctaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgtgattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaaa
gcttatgcacaattagtgaaatctaacatgcaagttctcgctaaagcgttacaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggatttcttagat
aagccttatagcgggaaagacgccgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcccggcgaaacgcgcagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaggaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaggccatggccagtcaattccctgtgtatcaacaacctattttttaa
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