KEGG   Helicobacter pylori 35A: HMPREF4655_20533
Entry
HMPREF4655_20533  CDS       T01892                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
hpo  Helicobacter pylori 35A
Pathway
hpo00300  Lysine biosynthesis
hpo00470  D-Amino acid metabolism
hpo01100  Metabolic pathways
hpo01110  Biosynthesis of secondary metabolites
hpo01120  Microbial metabolism in diverse environments
hpo01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:hpo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HMPREF4655_20533 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HMPREF4655_20533 (lysA)
Enzymes [BR:hpo01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     HMPREF4655_20533 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: ADU40664
LinkDB
Position
519239..520456
AA seq 405 aa
MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHL
ESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIE
KIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPV
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQRILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYHAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLEEEGLKGV
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaagtctttg
atttgctacgctttaaaggcgaattccaatttgagtatcctctctttattagcccattta
gagagcggggcggattgcgtttccataggcgagatatatagggctttaaaagccgggatc
aagccttataggatcgtgtttagcggggtgggtaagagcgaatttgaaatagaacaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattgcaaacgattgaa
aaaatcgcccaatctttagggataaaggccaggatttccattagaattaaccccaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcgtttttagagcctgtt
agcgtgcattttcatattggatcacagcttttagatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatagcgctagggatagatttgcgttttttt
gatgtgggcggagggattggcgtgagctatgaaaatgaagagactatcaagctttatgat
tacgcgcaaaggattttaaacgcgcttcaaggcttggatttgacgattatttgtgagcct
ggccgatcgatcgtggctgagagtggggaattgatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtgattgtggatgcgggcatgaatgattttttacgccccagt
ttgtatcatgctaagcatgccataagggttataacgccctctaaagggcgtaagatctcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaaggcgtccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggatct
agcatggccagtcaatacaattcgcgccccaaactattagaattagccctagaagatcac
caaatcagggtgataagaaaaagagaggctttagaagatttgtggcggttagaagaagaa
ggcttgaaaggggtttga

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