Helicobacter pylori 35A: HMPREF4655_20533
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Entry
HMPREF4655_20533 CDS
T01892
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo00300
Lysine biosynthesis
hpo00470
D-Amino acid metabolism
hpo01100
Metabolic pathways
hpo01110
Biosynthesis of secondary metabolites
hpo01120
Microbial metabolism in diverse environments
hpo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMPREF4655_20533 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF4655_20533 (lysA)
Enzymes [BR:
hpo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HMPREF4655_20533 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ADU40664
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All DBs
Position
519239..520456
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AA seq
405 aa
AA seq
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MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHL
ESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIE
KIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPV
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQRILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYHAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLEEEGLKGV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaagtctttg
atttgctacgctttaaaggcgaattccaatttgagtatcctctctttattagcccattta
gagagcggggcggattgcgtttccataggcgagatatatagggctttaaaagccgggatc
aagccttataggatcgtgtttagcggggtgggtaagagcgaatttgaaatagaacaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattgcaaacgattgaa
aaaatcgcccaatctttagggataaaggccaggatttccattagaattaaccccaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcgtttttagagcctgtt
agcgtgcattttcatattggatcacagcttttagatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatagcgctagggatagatttgcgttttttt
gatgtgggcggagggattggcgtgagctatgaaaatgaagagactatcaagctttatgat
tacgcgcaaaggattttaaacgcgcttcaaggcttggatttgacgattatttgtgagcct
ggccgatcgatcgtggctgagagtggggaattgatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtgattgtggatgcgggcatgaatgattttttacgccccagt
ttgtatcatgctaagcatgccataagggttataacgccctctaaagggcgtaagatctcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaaggcgtccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggatct
agcatggccagtcaatacaattcgcgccccaaactattagaattagccctagaagatcac
caaatcagggtgataagaaaaagagaggctttagaagatttgtggcggttagaagaagaa
ggcttgaaaggggtttga
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