Helicobacter pylori 35A: HMPREF4655_20660
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Entry
HMPREF4655_20660 CDS
T01892
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo02020
Two-component system
hpo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HMPREF4655_20660 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HMPREF4655_20660 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpo03021
]
HMPREF4655_20660 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hpo02035
]
HMPREF4655_20660 (fliA)
Transcription machinery [BR:
hpo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HMPREF4655_20660 (fliA)
Bacterial motility proteins [BR:
hpo02035
]
Flagellar system
Flagellar assembly proteins
Stator
HMPREF4655_20660 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0122
Sigma70_r3
Microp_apicomplexa_17
MarR
MarR_2
KORA
HTH_34
TetR_C_44
HTH_10
DUF4202
DUF7440
Motif
Other DBs
NCBI-ProteinID:
ADU40788
LinkDB
All DBs
Position
638450..639226
Genome browser
AA seq
258 aa
AA seq
DB search
MILMMENRMPKEIQKTQTSETSEKNIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLK
ERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRS
NRKLIKSIDIEITKHLNEHGKEPSDAYLAEVLGENIEKIKEAKTASDIYALVPIDEQFNA
IEQDEITKKIEAEELLEHVQKVLNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQ
IIKEVIKKVRKSLGVDHG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatgatggaaaatagaatgcccaaagaaattcaaaaaactcaaacaagcgaa
acaagcgaaaaaaatatagaaaaggttttgaacgcctatgataagcagcaacaccaccat
caagacgcgctcgctatccagtatttaccggccgtgcgcgctatggcgtttcgtttgaaa
gagcgcttgcctagctctattgattttaacgatctggtttctattggcactgaagaattg
attaaattagccaggcgttatgagagcgcgttaaacgattctttttgggggtatgctaaa
actcgtgtcaatggggcgatgctagattatttgcgctctttagatgtgatttctcgctct
aacagaaagctgattaaaagtattgatattgaaatcaccaaacaccttaatgagcatggg
aaagagcctagcgatgcgtatttagcggaagttttaggcgaaaatattgaaaaaattaaa
gaagccaaaacggcttcagatatttatgcgttagtgccaatagatgaacaattcaatgcg
attgagcaagatgaaatcactaaaaaaattgaagcagaagagttgttagagcatgtccaa
aaagtgctgaatcaaatgagcgaaagagagcaaatccttatccagctttattactttgaa
gagttgaatttgagcgagattaaagagattttaggcatcactgaatcgcgcatttctcaa
atcattaaagaagtgattaaaaaggtgcgtaaatccttaggagtggatcatggctga
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integrated database retrieval system
