Helicobacter pylori 35A: HMPREF4655_20902
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Entry
HMPREF4655_20902 CDS
T01892
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hpo
Helicobacter pylori 35A
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpo03032
]
HMPREF4655_20902 (gyrA)
03400 DNA repair and recombination proteins [BR:
hpo03400
]
HMPREF4655_20902 (gyrA)
Enzymes [BR:
hpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF4655_20902 (gyrA)
DNA replication proteins [BR:
hpo03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF4655_20902 (gyrA)
DNA repair and recombination proteins [BR:
hpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF4655_20902 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
ADU41007
LinkDB
All DBs
Position
complement(868653..871139)
Genome browser
AA seq
828 aa
AA seq
DB search
MQDNLINETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNAGLDKILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVQLIKTSQSPEAAKNALMERFTLSE
IQSKAILEMRLQRLTGLEREKIKEEYQNLLELIDDLNGILKSEDRLNEVVKTELLEVKEQ
FSSQRRTEIQEAYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNT
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGSNRSYSGIRAIVLDEGDELVSAKIVDKN
AKHLLIASYFGIFIKFPLEDVREIGRTTRGVIGIRLNENDFVVGAVVIGDDGNKLLSVSE
NGLGKQTLAEAYREQSRGGKGIIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVS
IKDIKETIGRNTSGVKLIDTADKVVYANSCPKEEESENLENSPTQLFE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatttaatcaatgaaacaaaaaacattgtagaagtggggattgattcttct
attgaagagagctatttagcttattcaatgagcgtgatcatagggcgcgctttaccggac
gctagagatggcttaaagcctgtgcataggcgtattttgtatgcgatgcatgaattaggc
ctcacttccaaagtcgcttataaaaaaagtgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataatgcggtttatgatgcgctagtgagaatggcgcaagatttt
tctatgcgtttggaattggtggatgggcaaggcaactttggctctattgatggcgataac
gctgcagcgatgcgttacactgaagccagaatgaccaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattatgatgacaccttaaaagagccc
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaacgggatcgctgta
gggatggcgacttctatcccccctcacaggattgatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaacgctggattagataaaattttagaatttgtcaaagggcctgat
tttcccactggtgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgtgccaaagtgcatgtggaaaagacaaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgcgatgaaagcgataga
gagggcattagagtggtgattgaattaaaaagagacgcgatgagtgaaattgtcttaaac
cacctctacaaactcaccaccatggaaaccacttttagcatcattttactcgctatttat
aataaagagcctaagattttcacgcttttagagttgttgcgccttttcttaaaccacaga
aaaaccattattataagacgcactatttttgaattagaaaaggctaaggctagagcgcat
attttagagggctatttgatcgcattagacaatattgatgaaatcgtgcaactcattaaa
acaagccaaagcccagaagcggccaaaaacgccttaatggagcgttttactttgagcgaa
atccagagcaaagccattttagaaatgcgtttgcagcgcttaacaggccttgaaagagag
aaaatcaaagaagaataccaaaacttgttggagcttattgatgatctcaatggcatttta
aaaagcgaagatcgtttgaatgaagtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctcaaaggcgcactgaaattcaagaagcttatgaaaatattgacatagaagat
ttgattgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagcttatgaaaggcaaaatcgtggcggtaagggcaagctttcaggcaacact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaataaggggcaattgtatcatttgaaagtctataagatcccagaagcgagccgg
atcgctatgggtaaagctatcgtgaatttaatctcgctcgctcctgatgaaaagatcatg
gcgactctaagcaccaaagactttagcgatgaacgctctttagctttcttcaccaaaaat
ggtgtggtgaagcgcaccaatttgagcgaatttggcagcaataggagttatagcggtatc
agagcgattgttttagatgaaggcgatgaattagtgagcgcaaaaattgtggataaaaac
gccaagcatttgctcatcgcatcgtattttggcattttcattaaattccctttagaagat
gtgcgcgagatcggaagaactactcgtggggttatagggattagactgaatgaaaatgat
tttgttgtcggtgcggtcgttattggcgatgatggcaacaagcttttgagcgtgagtgaa
aacgggcttggcaaacaaactttagccgaagcgtatagagagcaatctcgtggcggtaag
gggatcattggcatgaagctcactcaaaagaccggcaatctagtgagcgttatcagcgtg
gatgatgaaaacctggatttgatgatccttactgcaagcgcaaaaatgatcagagtttct
attaaagatattaaagaaaccatcggaagaaatactagtggggtaaaactcatagacacc
gccgataaagtcgtgtatgccaattcttgccctaaagaagaagagtcagaaaatttagaa
aattctcctacgcaattgtttgagtga
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