KEGG   Helicobacter pylori 35A: HMPREF4655_21058
Entry
HMPREF4655_21058  CDS       T01892                                 
Name
(GenBank) type IV secretion/conjugal transfer ATPase, VirB4 family
  KO
K12108  cag pathogenicity island protein 23 [EC:7.4.2.8]
Organism
hpo  Helicobacter pylori 35A
Module
hpo_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hpo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpo02044]
    HMPREF4655_21058
Enzymes [BR:hpo01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HMPREF4655_21058
Secretion system [BR:hpo02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HMPREF4655_21058
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 FtsK_SpoIIIE AAA_7 DUF87 AAA_23 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ADU41153
LinkDB
Position
1040586..1043537
AA seq 983 aa
MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD
YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK
DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE
FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
IQNHSIIDKYQALRQMYQQIKEY
NT seq 2952 nt   +upstreamnt  +downstreamnt
gtgtttgtggcaagcaagcaagccgatgaacaaaaaaagctaatcatagagcaagaggtt
caaaagcggcagtttcaaaaaatagaagaacttaaagcagacatgcaaaaaggtgtcaat
cccttttttaaagtcttgtttgatggggggaataggttgtttggtttccctgaaactttt
atttattcctctatatttatattgtttgtaacaattgtattatctgttattctttttcaa
gcctatgaacctgttttgattgtagcgattgttattgtgcttgtagctcttggattcaag
aaagactataggctttatcaaagaatggagcgagcgatgaaatttaaaaaaccttttttg
tttaagggcgtgaaaaacaaagcattcatgagcattttttccatgaagcctagtaaagaa
atggctaatgacatccacttaaatccaaacagagaagacagacttgtgagcgctgcaaac
tcctatctagcgaataactatgaatgttttttagatgatggggtgatccttactaacaac
tattctcttttaggcacaatcaaattggggggcattgattttttaaccacttccaaaaaa
gatctcatagagttacacgcttctatttatagcgtttttaggaattttgttacccctgaa
ttcaaattttattttcacactgttaaaaagaaaatcgttattgatgaaaccaatagggac
tatagtcttgctttttctaatgattttatgcgagcctataatgagaagcaaaaaagagaa
agtttttatgatattagtttttttctgaccatagagcaagatttattagacactctcaat
gaacctgttatgaataaaaagcattttgcagacaataattttgaagagtttcaaaggatt
attagagccaagcttgaaaacttcaaggatagaatagagctcatagaagagctattgagt
aaataccaccccactagattaaaagaatacactaaagatggcgttgtttattccaaacaa
tgcgagttttacaattttcttgtgggaatgaatgaagccccttttatttgcaacagaaaa
gacttgtatctcaaggaaaaaatgcatggtggggtgaaagaagtttattttgccaataag
catggaaaaatcttaaatgacgatttgagtgaaaaatattttagcgctattgagattagt
gaatacgcccctaaatcacagagcgatttgtttgataagatcaacgctctagacagcgaa
ttcatctttatgcatgcttattcgcctaaaaactcacaggttttaaaggacaaactagct
ttcacctctagaaggattattattagtgggggttctaaagagcagggcatgactttaggt
tgcttgagcgaattagtgggtaatggtgatattacgctaggcagttatggtaattcttta
gtgctgtttgctgatagctttgaaaaaatgaaacaaagcgtcaaggaatgcgtctctagt
cttaacgctaaaggttttttagccaacgcagcgactttctctatggaaaattactttttt
gccaaacattgctcttttatcacgcttccttttatttttgatgtaacttctaataatttt
gctgattttatcgctatgagagcgatgagttttgatggcaatcaagagaataacgcttgg
ggtaatagcgtcatgactctaaaaagcgagatcaattcgcctttttatctaaacttccac
atgcccactgattttggttcagcttcagcaggacacactttgatacttggctcaaccggt
tcaggtaagacggtgttcatgtcaatgactctaaacgctatgggacaatttgctcacaat
tttcctgctaatgtcagcaaagacaagcaaaagctcactatggtctatatggataaagat
tatggcgcttatgggaatattgtcgcaatgggtggggagtatgtcaagattgagctaggg
acagatacaggattaaatccttttgcttgggcggcttgtgtgcaaaaatccaatgcaaca
atggagcaaaaacaaacagctatttctgttgtcaaagagcttgtgaaaaacttagccacc
aaaagcgatgaaaaagatgaaaatggcaacagcatctcttttagcctagctgattctaat
acgcttgcagcggcagtaaccaaccttatcacaggagatatgaacctagattatcccatc
actcaactcattaatgctttcggaaaagaccacaatgatcctaatgggcttgtcgcgcga
ttagcgcctttttgcaaatcaaccaatggtgaatttcaatggctttttgataataaagca
accgatcgcttagatttttcaaaaacgattattggcgttgatgggtcaagtttcttagac
aacaatgatgtttcgccctttatttgtttttaccttttcgctcgtattcaagaggcaatg
gatgggcgtagatttgtcttagatattgatgaagcttggaaatatttaggcgatccaaag
gtcgcttattttgtaagagacatgctaaaaactgcaaggaaaagaaacgctattgttaga
cttgcgactcaaagcatcactgatcttttagcttgccctattgctgatactattagagaa
caatgccctacaaagatttttttgagaaacgatgggggcaatctttctgattaccaaaga
ttagccaatgttacagaaaaagaatttgaaatcatcactaaggggctagataggaaaatt
ctctacaaacaagatggaagccctagcgttatcgctagttttaatttgagaggcattcct
aaagaatatttgaaaattttatccacagatactgtatttgtcaaagaaattgacaagatt
atccaaaaccatagtatcatagataaatatcaggccttgaggcagatgtatcaacaaata
aaggagtattaa

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