KEGG   Helicobacter pylori 35A: HMPREF4655_21062
Entry
HMPREF4655_21062  CDS       T01892                                 
Name
(GenBank) hypothetical protein
  KO
K12104  cag pathogenicity island protein 19
Organism
hpo  Helicobacter pylori 35A
Module
hpo_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hpo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpo02044]
    HMPREF4655_21062
Secretion system [BR:hpo02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HMPREF4655_21062
SSDB
Motif
Pfam: Bin3
Other DBs
NCBI-ProteinID: ADU41157
LinkDB
Position
1045953..1047098
AA seq 381 aa
MKCFLSIFSFLTFCSLSLNGAEAVITLEPALKAIQADAQAKQKTAQAELKAIEAQSSAKE
KAIQAQIEGQLRTQLATMSAMLKGANGVINGVNSMTGGFFAGSDILLGVMEGYSSALSAL
GGNVKVIVEKQKINTQTEIQNMQIALQKNNEIIKLKMNQQNALLEALKNSFEPSVTLKTQ
MEMLSQALGSSSDNAKYIAYNTIGIKAFEETLKGFETWLKVAMQKATLIDYNSLTGQSLF
QSVIYAPALSFFSSMGAPFGIVETFTLAPTKCPYLDGLKISACLMEQVIQNYRKIVALIQ
NKLNDADFQNIAYLNGINEEIKTLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEE
QLKLERETTARNIASSKVIVK
NT seq 1146 nt   +upstreamnt  +downstreamnt
gtgaaatgttttttaagcatattttctttcttaactttttgtagtttatctctgaatggt
gcagaggcagtaataacgcttgaacctgccttaaaagccattcaagcggatgcacaagcc
aaacaaaaaaccgctcaagccgaattaaaagccatagaggctcaatctagtgccaaagaa
aaagccattcaagcgcaaatagagggacaattgagaactcagcttgcaactatgagtgct
atgttaaaaggggctaatggcgttattaatggtgtcaatagcatgacaggggggtttttt
gcaggttcagacatcttgcttggcgtcatggaagggtattcaagcgcgcttagcgcattg
ggagggaatgtcaaagtgatcgtggaaaaacaaaaaattaatacccaaacagaaatccaa
aacatgcaaattgcgctccaaaaaaataacgaaataatcaagctcaaaatgaaccagcaa
aacgctcttttagaagcgttaaaaaacagctttgaaccgagcgttaccctaaaaacacaa
atggaaatgctttctcaagctctaggaagttcttctgacaacgctaaatacatcgcttac
aatacgattggtatcaaggcgtttgaagaaaccttaaaaggttttgaaacatggttgaaa
gtggctatgcaaaaagcaacccttattgactacaattccctaacaggtcagtctttgttt
caaagcgtcatctatgcacctgctcttagttttttttcaagcatgggtgcaccatttgga
atcgttgaaacatttactctagcacccacaaaatgcccctatcttgatgggctaaaaatt
tcagcatgccttatggaacaggttattcagaattacagaaagattgtagcccttattcaa
aataaactaaatgatgcagattttcaaaatatcgcttatttgaatgggatcaatgaagaa
atcaaaaccttaaaaggatcagtagatttgaatgcgctcatagaagttgctatcttaaac
gcagaaaatcatttaaactatatagagaatcttgaaaaaaaagccgatctttgggaagaa
caactgaaattagagagagaaacgacagcaagaaacattgctagctctaaagttattgtc
aaatga

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