Helicobacter pylori 35A: HMPREF4655_21110
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Entry
HMPREF4655_21110 CDS
T01892
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo00470
D-Amino acid metabolism
hpo00550
Peptidoglycan biosynthesis
hpo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF4655_21110 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF4655_21110 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpo01011
]
HMPREF4655_21110 (murD)
Enzymes [BR:
hpo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HMPREF4655_21110 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpo01011
]
Precursor biosynthesis
Amino acid ligase
HMPREF4655_21110 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF3531
Motif
Other DBs
NCBI-ProteinID:
ADU41203
LinkDB
All DBs
Position
complement(1096684..1097952)
Genome browser
AA seq
422 aa
AA seq
DB search
MKISLFGHGKTTLALGRFFRKNHNEVKFFDDQFISSFKDSEGFVCYPSKDFNPNDSQLEI
VSPGISFTHPLVIKAKHLVSEYDYIDSLFDSVFTPTIISISGTNGKTTTTEMLTMLLEDF
KAVSGGNIGTPLIELFEKQSPLWVLETSSFSLHYTNKAYPLIYLLINVEADHLTWHCNFE
NYLNAKLKVLTLMPKTSLAILPLKFKEHSSVQNSQAQKIFFDKSEEVLERLKIPSNALFF
KGAFLLDAALALLVYEQFLKIKNLKWQDYRENALKRLNAFKIGSHKMEEFRDKQGRLWVD
DSKATNIDATLQALKTFKNQKIHLILGGDIKGVNLTPLFEEFKNHEISLYAIGSSTFIIQ
SLALEFNVSCQVCLELEKAVQEIKSVLSQNEIALLSPSAASLDQFSSYKERGERFKAFVL
KD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctctttatttgggcatggcaaaaccactctagccttagggcgtttttttaga
aaaaaccataacgaagtcaaattttttgacgaccaattcatctcatcttttaaagatagc
gagggttttgtttgctatcccagtaaggatttcaaccctaatgattcccaactagagata
gtcagccctggcattagcttcacgcaccctttagtcataaaagccaagcatttagtgagc
gaatacgattatattgatagcttgtttgattcggttttcacgcctactataataagtatt
agcggcactaatggtaaaaccaccacgacagaaatgctcaccatgcttttagaagatttt
aaggctgtgagtggggggaatatcggcacgcccttgattgaattgtttgaaaaacaatcg
cccttgtgggtgttagaaacaagctccttttctttgcactacaccaataaggcttaccct
ttaatctacttgctcatcaatgtagaagctgatcatttgacctggcattgcaattttgaa
aattatttgaacgctaaactcaaggttttaacattgatgcctaaaacttcgctcgctatc
ctccctttaaaattcaaagaacattcaagcgttcaaaattcgcaagcgcaaaaaatcttt
tttgacaaaagcgaagaggttttagagcgtttaaaaatcccttctaacgctctttttttt
aagggagcgtttttattagacgctgccttagctcttttagtttatgagcaatttttaaaa
ataaagaatttaaaatggcaagattatagagaaaacgcccttaaaagactgaacgctttt
aaaatcggctcgcataaaatggaagaatttagggataaacaagggcgtttgtgggtagat
gacagcaaagccacgaacattgatgccaccttacaagctctaaaaacctttaaaaaccaa
aaaatccatttgattttagggggcgatattaaaggagtcaatttaacccccctttttgaa
gaatttaaaaatcatgaaataagcctttatgccataggatcaagcacttttatcatccaa
tccttagcgttagaatttaatgtttcttgtcaggtttgtttggagttagaaaaagcggtt
caagaaattaaaagcgttttatcgcaaaatgaaatcgctttgctttcacccagcgcggcc
agtttggatcaattttcttcgtataaagaaaggggtgaaagatttaaagcgtttgtttta
aaagattaa
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