Helicobacter pylori 35A: HMPREF4655_21129
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Entry
HMPREF4655_21129 CDS
T01892
Name
(GenBank) outer membrane protein
KO
K15847
outer membrane protein BabA
Organism
hpo
Helicobacter pylori 35A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
RmuC
Fzo_mitofusin
Motif
Other DBs
NCBI-ProteinID:
ADU41222
LinkDB
All DBs
Position
complement(1118547..1120781)
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AA seq
744 aa
AA seq
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MKKHILSFALGSLLVSTLSAEDDGFYMSAGYQIGEAAQVVKNTKGVQELSDNYENLSNLL
TKYSTLNTLIKLSADPSAINTVRENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVV
GYVTQCGGNANGQKSTSSTTIFNNEPGYRSTSITCSLNGYTPGYYAPMSIENFKKLNKAY
QILQTALEKGLPALKENNGTVEVNYTYTCSGEGNNNCSPEVTGVNNQNGGNKTETQTIDG
KQVSTTISSKVVDSKAVGNKLEVSYTEITNALTNVPNSAQFLLAQASTLINTINNACPFF
SANNSSEANAPKFSTTTGKICGAFSDEISAIQKMITDAQELVNQTSAINSNEQTAPVGGS
GGKPFNPFTDASFAQGMLANAVAQAKMLNLSEQVGQTLNPNNLTGNFQNFVKNFLATCHN
PSTAGTSGTQGSAPGTVTTQTFASGCAYVKETITNLNNSIAHFGTQEQQIEQAENIADTL
VHFKSRYSELGNTYNSITTALSSVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQI
QTINQELGRNPFRKMGIVSSQTNNGAMNGIGIQVGYKQFFGQKRRWGARYYGFFDYNHAF
IKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEF
VNLATVNNVYNAKINTANFQFLFNLGLRMNLARAKKKGSDHVAQHGIELGVKIPTINTNY
YSFMGAELKYRRLYSVYLNYVFAY
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacatcctttcattcgctttaggctcgcttttagtttccactttgagcgct
gaagacgacggcttttacatgagcgcgggctatcaaatcggtgaagccgctcaagtggtg
aaaaacaccaaaggcgttcaagagctttcagacaactatgaaaacttgagtaacctttta
accaaatacagcaccctaaacaccttaatcaaattatccgctgatccgagcgcgatcaac
acggtgcgtgaaaatctgggtgcgagcgcgaagaacttgatcggcgataccaaaaattcc
cccgcctatcaagccgtgcttttagcgatcaatgcggcagtggggttttggaatgtcgta
ggctatgttacgcaatgcgggggtaatgccaatggtcaaaaaagcacctcttcaacaacc
atcttcaacaacgagccagggtatcgatccacttccatcacttgttctttgaacgggtat
acgcctggatactatgcccctatgagtattgagaatttcaaaaagcttaacaaagcctat
caaattctccaaacggctttagagaaaggcttgcctgcactcaaagaaaacaacggcacg
gtggaagtaaactatacttacacatgctcaggggaagggaataataactgctcgccagag
gtcacaggtgtaaacaatcaaaacggcggaaacaagactgaaacccaaaccatagacggc
aaacaagtgagcaccacgatcagttcaaaagtcgttgattcgaaagcagtaggtaataaa
ttagaggtttcttacaccgaaatcactaacgccttgaccaatgtgcctaatagcgctcaa
ttcttgttagcgcaagcgagcacgctcatcaacaccatcaacaacgcatgcccgtttttc
agtgctaataatagtagtgaggctaacgccccaaaattctctactactactgggaaaata
tgcggcgctttttcagatgaaatcagcgcgatccaaaagatgatcacggacgcgcaagag
cttgtcaatcaaacgagcgctattaacagcaatgaacaaacagctccagtgggaggcagt
gggggtaagcctttcaaccctttcacagacgctagcttcgctcaaggcatgctcgctaac
gctgtcgcgcaagccaaaatgctcaatttgagcgaacaagtggggcaaacccttaaccct
aacaatcttaccgggaattttcaaaattttgttaaaaactttttagccacatgccacaac
ccctcaacagctggcactagtggcacacaaggctcagctcctggcacagttaccactcaa
actttcgcttccggttgcgcctatgtaaaagaaaccataacgaatttaaacaacagcatc
gctcattttggcactcaagaacagcaaatagagcaagcagagaatatcgctgacactcta
gtgcatttcaaatcccgatacagcgaattgggcaacacttataacagcatcaccaccgcg
ctctctagtgtccctaacgcgcaaagcttgcaaaatgtggtgagcaaaaagaacaacccc
tatagcccgcaaggcatagaaaccaattactacctcaatcaaaattcttataaccaaatc
caaaccatcaaccaagaattggggcgtaacccctttaggaaaatgggcatcgtgagctct
caaaccaacaacggcgcgatgaatgggatcggcattcaagtgggttacaaacaattcttt
ggccaaaaaagaaggtggggcgctaggtattacggcttttttgattacaaccatgcgttc
atcaagtctagcttcttcaactccgcttctgatgtatggacttatggttttggagcggac
gctctctataacttcatcaacgataaagccaccaatttcttaggcaaaaacaacaagctt
tctgtggggctttttggcgggattgcgttagcgggcacttcatggcttaattctgaattc
gtgaatttagccaccgtgaataatgtctataacgctaagatcaacaccgctaatttccaa
tttttattcaatttaggtttgaggatgaatttagccagggctaagaaaaaaggcagcgat
catgtggctcagcatggcattgaactaggcgtgaaaatccctaccatcaacacgaactac
tattccttcatgggggctgaactcaaatacagaaggctctatagcgtgtatttgaattat
gtgttcgcttactag
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