Helicobacter pylori 35A: HMPREF4655_21257
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Entry
HMPREF4655_21257 CDS
T01892
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF4655_21257 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpo03400
]
HMPREF4655_21257 (priA)
Enzymes [BR:
hpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF4655_21257 (priA)
DNA repair and recombination proteins [BR:
hpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF4655_21257 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_19
AAA_22
ADDB_N
nSTAND3
PhoH
AAA_7
AAA_30
CobU
Zn_ribbon_6
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
ADU41337
LinkDB
All DBs
Position
complement(1263987..1265846)
Genome browser
AA seq
619 aa
AA seq
DB search
MFYHLIAPLKNKTPPLTYFSKEQHQKGAIVNIHLRNKTLLGVVLEEVSKPSFECLELEKT
PYFLLPFQIELALFIAQYYSANLSSVLNLFTPFKECDLVGLEKIEPVLNALSQTQTNALK
ELQKHSASLLFGDTGSGKTEIYMHSIAQTLEQKKSALLLVPEIALTPQMQQRLKRVFKEN
LGLWHSKLSQTQKKQFLEKLYSQEIKLVVGTRSALFLPLKELGLIIVDEEHDFSYKSHQS
PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKDKALVRLKGRYTPTQKNIIFEKTE
RFITPKLLEALKQVIDKNEQAIIFVPTRANFKTLLCQNCYKSVQCPFCSVNMSLHLKTNK
LMCHYCHFSNPIPKICNACQSEVLVGKRIGTMQVLNELEGLLKGAKIAILDKDHTSTPKK
LHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAVVLGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSSCLEKGVTLSSFKAPIEKIASSYRYLILLRSKNPLSLIKSVHAF
LKTARNIPCSVNMDPVDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcacttaatcgctcctttaaaaaataaaaccccccctttaacttacttttct
aaagagcaacaccaaaaaggagcgatagttaatatccatttaaggaataaaacgcttttg
ggcgtcgttcttgaagaagtttcaaaaccctcttttgaatgcctagaactagaaaaaacc
ccttattttttactcccctttcaaatagagctcgctctatttatcgctcaatattactcg
gctaatctttcttcagtcttaaatctttttaccccttttaaagaatgcgatttggtgggg
ttagaaaaaattgagcctgttcttaatgcgttaagccaaacgcaaacaaacgctttaaaa
gaattgcaaaaacattcagcaagcttgctctttggcgatacgggtagcgggaaaaccgag
atttatatgcattcaatcgctcaaactttagagcaaaaaaaaagcgctttattgttagtg
ccagaaatcgccctcacccctcaaatgcaacaacgccttaaaagggtttttaaagaaaat
ttaggcttgtggcatagcaaactctctcaaacccaaaaaaaacaatttttagaaaagctt
tattcgcaagaaatcaaattggtggtaggcacacgaagcgcgttgtttttaccccttaag
gagttgggtttaatcattgtagatgaagagcatgacttttcttataagtctcatcaaagt
cctatgtataacgctagggatttatgcttgtatttatcccataaattccctattcaagtg
attttaggctctgctacgccaagtttaaatagttacaaacgctttaaagataaggcttta
gtacgcttaaaggggcgctacacgcctacgcaaaaaaacattatttttgaaaaaaccgag
cgttttatcacgcccaaactcctagaagcgctaaaacaagttatagacaaaaacgagcaa
gccattatttttgtgcctacaagggctaatttcaaaaccttgctgtgtcaaaattgctac
aaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaaaaccaacaaa
ctcatgtgccattattgccatttttcaaaccctatccctaaaatttgcaacgcatgtcag
agtgaagttttagtgggtaaaaggataggcaccatgcaagtgttgaacgagttggaaggc
cttttgaaaggcgctaaaatagccattttagataaagatcataccagcacgccaaaaaaa
ctccacaatattttaaacgatttcaacgctcaaaaaaccaatatcttaatcggcactcaa
atgataagcaaagggcatgattacgctaaagtgagtttagcggttgttttaggcatagac
aatatcattaaatccaatagttatagggctttagaagaaggcgtgtcgttactttatcaa
atcgctgggaggagcgctaggcaaatttctggtcaagtgttcattcaaagcactgaaacg
gatctattagaaaatttcttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcgaactctacccgcctttttcaaggctgtgtttgttagaatttaagcataaaaac
gaagaaaaagcccaacaattgagcctaaaagcctctcaaaccctttcttcgtgtttagaa
aagggcgtaacgctctctagctttaaagcccccattgaaaaaatcgcttcttcttaccgc
taccttattttattgcgttccaaaaaccctttaagcctaatcaaaagcgtgcatgcgttt
ttaaaaaccgcccggaatatcccttgcagcgtgaatatggatcctgtggatattttttaa
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