Helicobacter pylori P12: HPP12_0247
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Entry
HPP12_0247 CDS
T00786
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hpp
Helicobacter pylori P12
Pathway
hpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPP12_0247 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpp03019
]
HPP12_0247 (deaD)
03009 Ribosome biogenesis [BR:
hpp03009
]
HPP12_0247 (deaD)
Enzymes [BR:
hpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPP12_0247 (deaD)
Messenger RNA biogenesis [BR:
hpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPP12_0247 (deaD)
Ribosome biogenesis [BR:
hpp03009
]
Prokaryotic type
rRNA helicases
HPP12_0247 (deaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Cas3-like_C_2
AAA_30
AAA_22
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
ACJ07406
UniProt:
B6JKH8
LinkDB
All DBs
Position
252636..254114
Genome browser
AA seq
492 aa
AA seq
DB search
MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERAEAIMHLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGTISLYEQLTEIFEPS
QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKAPKPTHKKTHQHDQARFFKKGQHKDRHP
KTNRYSKKPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaatcaaccaccactccctacagaaattgatgatgacgcttatcataagccg
agttttaatgatttgggcttaaaagaatcggttttaaaatccgtttatgaagccggtttc
acttccccaagccccattcaagaaaaggccattccggctgttttgcaaggccgagatgtc
atcgcgcaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacaccatagaggccttagtgatcacgcccaccagagaattagcc
atgcaaattagcgatgagattttcaaattgggcaaacacaccaggactaaaaccgtgtgc
gtgtatggaggccagagcgttaaaaaacaatgcgaatttattaagaaaaacccccaagtg
atgatcgctacaccaggaagactgttggatcacttaaagaatgagcgcatccataaattt
gtgcctaaagtggtcgttttagatgaaagcgatgaaatgctggatatggggtttttagac
gatattgaagagatttttgactaccttcctagcgaagcgcagatcttacttttttcagcc
acgatgccagagccgatcaaaaggctagcggataagattttagaaaaccctattaaaatc
catatcgctccttctaatatcactaacaccgacatcacccaacgcttttatgtgatcaat
gagcatgagagggccgaagcgatcatgcaccttttagacacccaagcgcccaaaaaaagc
attgttttcacacgcaccaaaaaagaggccgatgaattgcaccaattccttgcttctaaa
aattacaaaagcaccgccttgcatggggatatggatcaaagggatcgccgcgcttctatc
atggcgtttaaaaaaaatgacgctgatgtgttggtggctacagatgtggcgagccgtggg
ctagacattagcggtgtaagccatgtgtttaattaccacttgcccctaaataccgagagc
tatatccatcgcatcgggagaactgggcgagcgggcaaaaaaggcatggcgatcacttta
gtaacccccttagaatacaaagagcttttacgcatgcaaaaagaaattgattcagagatt
gaactttttgaaatccccaccattaatgaaaatcagatcatcaaaaccttgcatgacgct
aaagtgtctgaagggactatcagcctttatgaacagcttaccgaaatttttgagccgtct
caattggttttaaaacttttgagtttgcagtttgaaaccagcaaaatcggcttgaaccag
caagaaattgatgcgattcaaaaccctaaagagaaagcgccaaaacccacccataaaaaa
acgcaccaacatgatcaagcgcgttttttcaaaaagggccagcacaaagacagacaccct
aaaacaaatcgttattctaaaaaacccaaacgccgttaa
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