Helicobacter pylori P12: HPP12_0502
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Entry
HPP12_0502 CDS
T00786
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hpp
Helicobacter pylori P12
Pathway
hpp00470
D-Amino acid metabolism
hpp00550
Peptidoglycan biosynthesis
hpp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPP12_0502 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPP12_0502 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpp01011
]
HPP12_0502 (murD)
Enzymes [BR:
hpp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HPP12_0502 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpp01011
]
Precursor biosynthesis
Amino acid ligase
HPP12_0502 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF3531
Motif
Other DBs
NCBI-ProteinID:
ACJ07656
UniProt:
B6JL78
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All DBs
Position
525986..527254
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AA seq
422 aa
AA seq
DB search
MKISLLGHGKTTLALARFFKKNHNEVKFFDDQFTSFFKDREGFLCYPSKDFNPNDSQLEI
VSPGISFTHPLVIKAKHLVSEYDYINSLFDLVFTPTIISISGTNGKTTTTEMLTMLLGDF
KAVSGGNIGTPLIELFEKQSPLWVLETSSFSLHYTNKAYPLIYLLINVKADHLTWHCNFE
NYLNAKLKVLSLMPKTSLAILPLKFKEHSSVQNSQVQKIFFDKSEEILECLKIPSDALFF
KGAFLLDAALALLVYEQFLKIKNLKWQDYRENALKRLNAFKIGSHKMEEFRDKQGRLWVD
DSKATNIDATLQALKTFKNQKIHLILGGDIKGVNLTPLFEEFKNHEVSLYAIGSSAFIIQ
ALALEFNVSCQVCLELEKAVQEIKSVLSQNEIALLSPSAASLDQFSSYKERGEKFKAFVL
KD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttctttattggggcatggcaaaaccactctagccctagcgcgtttttttaaa
aaaaaccataacgaagtcaaattttttgatgatcaattcacttcattttttaaagataga
gagggttttctttgctaccccagtaaggatttcaaccctaatgattcccaattagagata
gtcagccctggcattagtttcacgcaccctttagtcataaaagccaagcatttagtgagc
gaatacgattatattaatagcttgtttgatttggttttcacgcctactataatcagtatt
agcggcactaacgggaaaaccaccacgaccgaaatgctcaccatgcttttaggagatttt
aaggctgtgagtggggggaatatcggcacgcccttgattgaattgtttgaaaagcaatcg
cccttgtgggtactagaaacaagctccttttctttgcattacactaataaggcttaccct
ttaatctacttgctcatcaatgtcaaagctgatcatttgacttggcattgcaattttgaa
aattatttgaacgctaaactcaaggttttatcgttgatgcctaaaacttcgctcgctatc
ctccctttaaaattcaaagagcattcaagcgttcaaaactcgcaagtgcaaaaaatcttt
tttgacaaaagcgaagaaattttagagtgtttaaaaatcccttctgacgccctttttttt
aagggagcgtttttattagacgcggctttagcccttttagtttatgagcaatttttaaaa
ataaagaatttaaaatggcaagattatagagaaaacgcccttaaaagactgaacgctttt
aaaattggctcgcataaaatggaagaatttagggataaacaagggcgtttgtgggtagat
gacagcaaagccacgaatattgatgccaccttacaagccctaaaaacctttaaaaaccaa
aaaatccatttgattttagggggcgatattaaaggggtcaatttaacccccctttttgaa
gaatttaaaaatcatgaagtaagcctttatgcgataggatcaagcgcttttatcatccaa
gccttagcgttagaatttaatgtttcttgtcaggtttgtttggagttagaaaaagcggtt
caagaaattaaaagcgttttatcgcaaaatgaaattgctttgctttcgcctagtgcggcc
agtttggatcaattttcttcgtataaagaaaggggtgaaaaatttaaagcgtttgtctta
aaggattaa
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