Helicobacter pylori P12: HPP12_0555
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Entry
HPP12_0555 CDS
T00786
Symbol
cagA
Name
(GenBank) cytotoxin-associated protein A
KO
K15842
cytotoxicity-associated immunodominant antigen
Organism
hpp
Helicobacter pylori P12
Pathway
hpp05120
Epithelial cell signaling in Helicobacter pylori infection
Module
hpp_M00564
Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:
hpp00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05120 Epithelial cell signaling in Helicobacter pylori infection
HPP12_0555 (cagA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CagA_N
CagA
DUF5659
Motif
Other DBs
NCBI-ProteinID:
ACJ07709
UniProt:
B6JLD1
LinkDB
All DBs
Position
585581..589225
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AA seq
1214 aa
AA seq
DB search
MTNETINQQPQTEAAFNPQQFINNLQVAFLKVNNAVASYDPDQKPIVDKNDRDNRQAFDG
ISQLKEEYSNKAIKNPTKKNQYFSDFINKSNDLINKDNLIDVESSTKSFQKFGDQRYQIF
TSWVSHQNDPSKINTRSIRNFMENIIQPPIPDDKEKAEFLKSAKQSFAGIIIGNQIRTDQ
KFMGVFDESLKERQEAEKNGEPTGGDWLDIFLSFIFDKKQSSDVKEAINQEPVPHVQPDI
ATTTTDIQGLPPEARDLLDERGNFSKFTLGDMEMLDVEGVADIDPNYKFNQLLIHNNTLS
SVLMGSHDGIEPEKVSLLYAGNGGFGAKHDWNATVGYKDQQGNNVATIINVHMKNGSGLV
IAGGEKGINNPSFYLYKEDQLTGSQRALSQEEIRNKIDFMELLAQNNAKLDNLSEKEKEK
FQNEIKDFQKDSKAYLDALGNDRIAFVSKKDTKHSALITEFGNGDLSYTLKDYGKKADKA
LDREKNVTLQGSLKHDGVMFVDYSNFKYTNASKNPNKGVGVTNGVSHLEAGFDKVAVFNL
PDLNNLAITSFVRRNLEDKLVTKGLSIQEANKLIKDFLNSNKELVGKALNFNKAVADAKN
TGNYDEVKKAQKDLEKSLKKREHLEKEVAKNLESKSGNKNKMEAKSQANSQKDEIFALIN
KEANRDARAIAYAQNLKGIKMELSDKLENVNKNLKDFSKSFDEFKNGKNKDFSKAEETLK
ALKGSVKDLGINPEWISKVENLNAALNEFKNGKNKDFSKVAQAKSDLENSVKDVIINQKI
TDKVDNLNQAVSVAKATGDFSRVEQALADLKNFSKEQLAQQAQKNEDFNTGKNSALYQSV
KNGVNGTLVGNGLSKAEATTLSKNFSDIKKELNAKLGNFNNNNNNGLKNEPIYAKVNKKK
TGQAASHEEPIYAQVAKKVNAKIDRLNQIASGLGGVGQAAGFPLKKHDKVEDLSKVGLSA
SPEPIYATIDDLGGPFPLKKHDKVEDLSKVGLSASPEPIYATIDDLGGPFPLKKHDKVED
LSKVGLSRNQKLAQKIDNLNQAVSEAKAGFFGNLEQTIDKLKDSTKYNPVNLWVESAKKV
PASLSAKLDNYATNSHTRINSNIKNGAINEKATGMLAQKNPEWLKLVNDKIVAHNVGSVP
LLEYDKIGFNQKNMKDYSDSFKFSTNLNNAVKDIKSGFTQFLANAFSTGYYCLARENAEH
GIKNVNTKGGFQKS
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgaaaccattaaccaacaaccacaaaccgaagcggcttttaacccgcagcaa
tttatcaataatcttcaagtggcttttcttaaagttaataacgctgtcgcttcatacgat
cctgatcaaaaaccaatcgttgataagaacgatagggataacaggcaagcttttgatgga
atctcgcaattaaaggaagaatactccaataaagcgatcaaaaatcctaccaaaaagaat
cagtatttttcagactttatcaataagagcaacgatttaatcaacaaagacaatctcatt
gatgtagaatcttccacaaagagctttcagaaatttggggatcagcgttaccaaattttc
acaagttgggtgtcccatcaaaacgatccgtctaaaatcaacacccgatcgatccgaaat
tttatggaaaatatcatacaaccccctatccctgatgataaagaaaaagcagagtttttg
aaatctgccaaacaatcttttgcaggaattatcatagggaatcaaatccgaacggatcaa
aagttcatgggcgtgtttgatgaatccttgaaagaaaggcaagaagcagaaaaaaatgga
gagcctactggtggggattggttggatatttttttatcatttatatttgacaaaaaacag
tcttctgatgtcaaagaagcaatcaatcaagaaccagttcctcatgtccaaccagatata
gccactaccaccaccgacatacaaggcttaccgcctgaagctagagatttacttgatgaa
aggggtaatttttctaaattcactcttggcgatatggaaatgttagatgttgagggcgtc
gccgacattgatcctaattacaagttcaaccaattattgattcacaataacactctgtct
tctgtgttaatggggagtcatgatggcatagaacctgaaaaagtttcattattgtatgcg
ggcaatggtggttttggagccaagcacgattggaacgccaccgttggttataaagaccaa
caaggtaacaatgtggctacaataattaatgtgcatatgaaaaacggcagtggcttagtc
atagcaggtggtgagaaagggattaataaccctagtttttatctctacaaagaagaccaa
ctcacaggctcacaacgagcattgagtcaagaagagatccgaaacaaaatagatttcatg
gaacttcttgcacaaaacaatgctaaattagacaacttgagcgagaaagagaaagaaaaa
ttccaaaatgagattaaggatttccaaaaagactctaaggcttatttagacgccctaggg
aatgatcgtattgcttttgtttctaaaaaagacacaaaacattcagctttaattactgag
tttggtaatggggatttgagctacactctcaaagattatgggaaaaaagcagataaagct
ttagatagggagaaaaatgttactcttcaaggtagcctaaaacatgatggcgtgatgttt
gttgattattctaatttcaaatacaccaacgcctccaagaatcccaataagggtgtaggc
gttacgaatggcgtttcccatttagaagcaggctttgacaaggtagctgtctttaatttg
cctgatttaaataatctcgctatcactagtttcgtaaggcggaatttagaggataaacta
gtcactaaaggattgtccatacaagaagctaataagcttatcaaagactttttgaatagc
aacaaagaattggttggaaaagctttaaacttcaataaagctgtagctgacgctaaaaac
acaggcaactatgatgaagtgaaaaaagctcagaaagatcttgaaaaatctctaaagaaa
cgagagcatttagagaaagaagtagcgaaaaatttggagagcaaaagtggcaacaaaaac
aaaatggaagcgaaatctcaagctaacagccaaaaagatgagatttttgcgttgatcaat
aaagaggctaatagggacgcaagagcaatcgcttacgctcagaatcttaaaggcatcaaa
atggaattgtctgataaacttgaaaatgtcaacaagaatttgaaagactttagtaaatct
tttgatgaattcaaaaatggcaaaaataaggatttcagcaaggcagaagaaacactaaaa
gcccttaaaggttcggtgaaagatttaggtatcaatccagaatggatttcaaaagttgaa
aaccttaatgcagctttgaatgaattcaaaaatggcaaaaataaggatttcagcaaggta
gcgcaagcaaaaagcgaccttgaaaattccgttaaagatgtgatcatcaatcaaaagata
acggataaagttgataatctcaatcaagcggtatcagtggctaaagcaacgggtgatttc
agtagggtagagcaagcgttagccgatctcaaaaacttctcaaaggagcaattggctcaa
caagctcaaaaaaatgaagatttcaatactggaaaaaattctgcactataccaatccgtt
aagaatggtgtgaatggaaccctagtcggtaatgggttatctaaagcagaagccacaact
ctttctaaaaacttttcggacatcaagaaagagttgaatgcaaaacttggaaatttcaat
aacaataacaataatggactcaaaaacgaacccatttatgctaaagttaataaaaagaaa
acagggcaagcagctagccatgaagaacccatttacgctcaagttgctaaaaaggtaaat
gcaaaaattgaccgactcaatcaaatagcaagtggtttgggtggtgtagggcaagcagcg
ggcttccctttgaaaaagcatgataaagttgaagatctcagtaaggtagggctttcagct
agccctgaacccatttatgctacgattgatgatctcggcggacctttccctttgaaaaag
catgataaagttgaagatctcagtaaggtagggctttcagctagccctgaacccatttat
gctacgattgatgatctcggcggacctttccctttgaaaaagcatgataaagttgaagat
ctcagtaaggtagggctttcaaggaatcaaaaattggctcagaaaattgacaatctcaat
caagcggtatcagaagctaaagcaggtttttttggcaatctagagcaaacgatagacaag
ctcaaagattctacaaaatacaatcctgtgaatctatgggttgaaagtgcaaaaaaagta
cctgctagtttgtcagcgaaactagataattatgctactaacagccacacacgcattaat
agcaatatcaaaaatggagcaatcaatgaaaaagcgaccggcatgctagcgcaaaaaaac
cctgagtggctcaagctcgtgaatgataagatagttgcgcataatgtgggaagcgttcct
ttgttagagtatgataaaattggcttcaaccagaagaatatgaaagattattctgattcg
ttcaagttttccaccaacttgaacaatgctgtaaaagacattaagtctggctttacgcaa
tttttagccaatgcattttctacaggatattactgcttggcgagggaaaatgcagagcat
ggaatcaagaatgttaatacaaaaggtggtttccaaaaatcttaa
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integrated database retrieval system
