KEGG   Helicobacter pylori P12: HPP12_0726
Entry
HPP12_0726        CDS       T00786                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma and tau subunits
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
hpp  Helicobacter pylori P12
Pathway
hpp03030  DNA replication
hpp03430  Mismatch repair
hpp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPP12_0726 (dnaX)
   03430 Mismatch repair
    HPP12_0726 (dnaX)
   03440 Homologous recombination
    HPP12_0726 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpp03032]
    HPP12_0726 (dnaX)
   03400 DNA repair and recombination proteins [BR:hpp03400]
    HPP12_0726 (dnaX)
Enzymes [BR:hpp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPP12_0726 (dnaX)
DNA replication proteins [BR:hpp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HPP12_0726 (dnaX)
DNA repair and recombination proteins [BR:hpp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HPP12_0726 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNAX_ATPase_lid AAA AAA_22 RuvB_N AAA_14 RCF1-5-like_lid AAA_5 DNA_pol3_gamma3 AAA_30 EH_Signature DEAD AAA_assoc_2 AAA_19
Other DBs
NCBI-ProteinID: ACJ07878
UniProt: B6JLV0
LinkDB
Position
complement(778366..780096)
AA seq 576 aa
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKSVPCDTCIQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEVRLQERYAILENYETESVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQTKESVFQPLNQ
NANASKQEPKSAEKIEKPEKIESAETPQTPMLSAKDRIFHNLFKQVQTLVYERNYELGAV
FEKNIRFIDFDSQTKTLTWESLATDKDKELLRERFKIVKSIVDGVFGKGENIKIALKNQN
KSALEVVKELKFPYSKPKPTTETTAEMKEKETKEVAEKETKEKETKEKEVQENDTKEVQE
TQPKEAPTALQEFMANHSNLIEEIKSEFEIKSVELL
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcgggtaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaagaaggaccaaaatccgtgccttgcgatacttgcatccaatgccagagcgct
ttaaacaaccaccatatagatattatagaaatggatggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacccgctacaaaccaagctttgggcgttataaaatc
tttatcattgatgaagtgcatatgttcaccactgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgctttgaaattg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaggtgagctatgaaacaagtgcg
ttagaaaaactggctcacagcgggcaagggagcctaagggatacgatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaagcaaggtggctgaaatgttagga
gcgattgacagaagcgttttagaggatttttttcaaagcctaatcaatcaagatgaagtg
cgattgcaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcgtattccatccttttaata
gagcgcttttttaaaatcattatgagtagtctcagtcttttgaaagaaggggctaatgct
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gatgatgcgattttggaattagagcaaaccaaagaaagcgtttttcagcccttaaatcaa
aacgctaacgcctctaaacaagaacctaaaagcgcagagaaaatagaaaagccagaaaaa
atagagagcgcagaaaccccgcaaactcccatgctttcagctaaagatcgcatttttcac
aaccttttcaaacaagttcaaacattggtttatgagcgcaattacgaattaggggcggtg
tttgaaaaaaatatccgtttcattgattttgacagccagactaaaaccttgacttgggag
tctttagccactgataaggataaagagcttttaagagaacgatttaaaatcgtgaaaagt
atcgttgatggggtttttggcaagggtgaaaatatcaaaatcgctttaaaaaatcaaaat
aaaagtgctttagaagtggttaaagagcttaaattcccctattcaaagcccaaaccaacc
accgaaacgacggctgaaatgaaagaaaaagaaactaaagaggtggctgaaaaagaaact
aaagaaaaagaaactaaagaaaaagaggttcaagaaaacgacactaaagaggttcaagaa
acccaacccaaagaagcccctacagccttgcaagaatttatggctaaccattccaatctc
attgaagagattaagagcgagtttgaaatcaaaagcgtggaattgttatga

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