Helicobacter pylori P12: HPP12_1259
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Entry
HPP12_1259 CDS
T00786
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpp
Helicobacter pylori P12
Pathway
hpp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPP12_1259 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpp03021
]
HPP12_1259 (rpoA)
03400 DNA repair and recombination proteins [BR:
hpp03400
]
HPP12_1259 (rpoA)
Enzymes [BR:
hpp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPP12_1259 (rpoA)
Transcription machinery [BR:
hpp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPP12_1259 (rpoA)
DNA repair and recombination proteins [BR:
hpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPP12_1259 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
ACJ08411
UniProt:
B6JND3
LinkDB
All DBs
Position
complement(1347224..1348258)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKESNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPIGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEQIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKKVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYTQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRESLKKRLEKLEDKGDND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
agcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
catcctattagaaggctcttgcttttaagctctgtggggtatgctcctataggtttaaag
attgaaggcgtccatcatgagtttgactctttaaggggggttactgaagatgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagccaaggcgttagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgaattctgagcagatagaaatcgttaatcctgaaatgcctctagccaca
atcaacgaagacgctcaattgaatttttcgctcattatttataaaggaatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgagggttacatgccgctagacggctctttc
acgccgattaaaaaggtcgtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ttgtcagcggtgaaagtgatgagcaagcaactaggcgtttttggcgaaagacccattgct
aacacggagtattcaggcgattatactcaaagagatgacgctaaagacttgagcgctaaa
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactcgtgttgatgagtgaagaagagcttaagggcgtgaaaaacatgggc
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagccctgaacaaagagaaagtttaaagaaaagattagaaaaattagaagataaa
ggagataacgactga
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integrated database retrieval system
