Helicobacter pylori P12: HPP12_1456
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Entry
HPP12_1456 CDS
T00786
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpp
Helicobacter pylori P12
Pathway
hpp03420
Nucleotide excision repair
hpp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPP12_1456
03430 Mismatch repair
HPP12_1456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpp03400
]
HPP12_1456
Enzymes [BR:
hpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPP12_1456
DNA repair and recombination proteins [BR:
hpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPP12_1456
MMR (mismatch excision repair)
Other MMR factors
HPP12_1456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ACJ08604
UniProt:
B6JNX6
LinkDB
All DBs
Position
complement(1532951..1534996)
Genome browser
AA seq
681 aa
AA seq
DB search
MGFEKSILGNLNGAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLNHQAFIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSDE
VKTLCKQLKISSFRASISQIKNGMMDLSAQDSECYKAYELYQNALKKDNLVDFDDLLCLS
LKILQDNEKLAKETSEHYYYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKRGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVSFYERAEVKDALAFMHLVAKKDDRFFIKRVLNKPSRGLGKITQEWIFSLLDDLDLN
LEEALKLGAFKDKLNPKNEYALKKFMTMIGRLREAFEISVEKFCAQFLEETNLLKSYEKE
DNYEEREGFVKELLTLLKEHFKTNPTHSLLDFLNESVLDVHNTENAPKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVKERSYFGRKIS
CSPSVFLEEAQLLKQEKPPKQNHQKNAPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISEKFVEKVDNGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgaaaaaagcattttaggcaatttgaacggagcgcaaaaaatcgctgcaagc
cacattcaagggccattgctcattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagtaaagaaatgcaagaaagggctttgaaattattgaac
catcaagcgtttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgagccttttaaaaagagcgtgcgatttttcggtgctagatagcgatgaa
gtcaaaacgctgtgcaaacagctcaaaatttcaagcttcagggcgagcatttctcaaatc
aaaaacggcatgatggatttaagcgcgcaagatagcgaatgctataaagcgtatgagctt
tatcaaaacgcactcaaaaaagacaatttagtggattttgacgatttgctttgtttaagc
cttaagattttacaagataatgaaaaactcgccaaagagactagcgagcactactattac
attatggtagatgagtatcaagacacgaacgccctgcaattagaatttttaaaaaaattg
agtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggtttt
aggggggccgatatttctaacattttaaatttttccaagcattttaaaggggctaaggtg
gtgaaattagagaccaactaccgctccagcgctgaaattttagcgtgcgctaactccctt
attagccataaccaacaccgccatattaaaacacttcaaagtttcaaaggctcgcataaa
agcgtggtttgtaaagaatatttgacgcaaaaagaagagagcttagatgtggcttatcaa
atcaaagcccttttaaagaggggcgaaaatttagaaaatatcgctattttgtatcgctta
aacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccctataggctt
attggggcggtgagtttttatgaaagagccgaggttaaagacgctttggcgttcatgcat
ttagtggctaaaaaagacgatcgcttttttattaagcgcgttttaaacaagccctcaaga
ggccttggcaagatcactcaagaatggattttttcccttttagatgatttggatttgaat
ttagaagaagcgctaaaacttggggcgtttaaagacaaactaaaccctaaaaacgaatac
gctttaaagaaattcatgactatgatagggcgtttgagggaggcttttgaaatttcagta
gagaagttttgcgctcagtttttagaagagaccaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggctttgtcaaagagcttttaaccttattgaaagagcat
tttaaaactaaccccacgcattctttgctggattttttgaatgaaagcgtgctagatgtc
cataatacagaaaacgcgccaaaagtgagttgcatgagcgtgcatatgagtaagggatta
gagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcataggggattc
aatcaagaaagcgatttggaagaagaaagacgcttggcttacgtggcaatcactagggct
aaagaaggattgcaactttcttatgtcaaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtgtttttagaagaagcccagttgctcaaacaagaaaaaccccctaaa
caaaatcaccaaaaaaacgcgcccattaaagtgggggatttgatcaaacataagattttt
ggcaccgggagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatcaat
tgcggagggaatgtctatgataaaatctcagaaaaatttgtagaaaaagtggataacggg
ttttga
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