Helicobacter pylori P12: HPP12_1458
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Entry
HPP12_1458 CDS
T00786
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hpp
Helicobacter pylori P12
Pathway
hpp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPP12_1458 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpp01007
]
HPP12_1458 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpp03016
]
HPP12_1458 (serS)
Enzymes [BR:
hpp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HPP12_1458 (serS)
Amino acid related enzymes [BR:
hpp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HPP12_1458 (serS)
Transfer RNA biogenesis [BR:
hpp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPP12_1458 (serS)
Prokaryotic type
HPP12_1458 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
SOGA
Motif
Other DBs
NCBI-ProteinID:
ACJ08606
UniProt:
B6JNX8
LinkDB
All DBs
Position
complement(1537540..1538787)
Genome browser
AA seq
415 aa
AA seq
DB search
MIDKKLLLQDFEMVALSLKKRNHAMDDGLERLREVITHYKKQLIELEGLQAFQNKVSKEF
GIKMAQKADTSDLKKELESNKIKLNELSKSVSELEQQIDLKLSIIPNLVDEKTPLGANEE
DNIEIKKILTPRVFNFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIY
LMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY
NDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQE
CMLESASEILRALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQ
ARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgattgataaaaaacttttattgcaagattttgagatggtggctctttctttaaaaaag
cgtaaccatgcgatggatgatggattggagcgtttgcgcgaagtcatcacgcattataaa
aagcaactcattgaattggaaggcttgcaagcctttcaaaacaaggtttctaaagaattt
ggcatcaaaatggctcaaaaagcggatacaagcgatctcaaaaaagagctagaaagcaat
aaaatcaaattgaatgagctttctaaaagcgtgagcgaattggagcaacaaattgatttg
aagctttccataatccctaatctagtggatgaaaaaacccctttaggcgcgaatgaagaa
gacaacatagaaattaaaaaaatcttaaccccaagggtttttaatttcaaacccaaagag
cattttgaactcgctcaacaaaacggctggattgattttgaaagcggcgtgaaactcgcc
aaaagccgtttttcggtcattaggggttttggggctaaaatttatcgcgcgctcatttat
ttaatgttggattttaatgaaaaaaatggctttgaaatcatctacacgccggcgttagtg
aatgaaaaaatgctttttgggaccgggcaattacccaaattcaaagaagatgttttcaaa
atagaaaatgaaaatttgtatttaatccccaccgctgaagtaacgctcactaatctctac
aacgacacgatcattagcgttgaaaacctccccattaaaatgaccgcgcacacgccttgt
tttaggagcgaagcagggagcgctggcaaggacacaagggggatgataagacagcaccaa
tttgataaagtagagctagtggctatcacgcaccctaaagaaagcgatgcgatgcaagag
tgcatgctagagagcgcgagcgaaattttaagggctttggaattgccgcaccggtttgtg
caattgtgcagcggggatttaggctttagcgcgagcaacacgatagacattgaagtgtgg
ttgcccgggcaaaattgttacagagaaatcagctccgtgtctaacacgagggattttcag
gctaggcgtgccaaaatccgcttcaaagaaaatcaaaaaaaccaattagcacacacctta
aacggctcttctttagcggtaggcaggacgatggtcgctttaatggaaaaccaccagcaa
gcggatgggagcattcatattcctaaggcgttagaaaaatacctttaa
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