Helicobacter pylori P12: HPP12_1527
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Entry
HPP12_1527 CDS
T00786
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpp
Helicobacter pylori P12
Pathway
hpp03030
DNA replication
hpp03430
Mismatch repair
hpp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPP12_1527
03430 Mismatch repair
HPP12_1527
03440 Homologous recombination
HPP12_1527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpp03032
]
HPP12_1527
03400 DNA repair and recombination proteins [BR:
hpp03400
]
HPP12_1527
Enzymes [BR:
hpp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPP12_1527
DNA replication proteins [BR:
hpp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPP12_1527
DNA repair and recombination proteins [BR:
hpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPP12_1527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACJ08673
UniProt:
B6JP45
LinkDB
All DBs
Position
1620534..1621505
Genome browser
AA seq
323 aa
AA seq
DB search
MIKISLNSNKRAWMWWFQGVIFLNLKIVSWLLKAYRMPINLLHKDIQALIARLKHQDLSL
GMLEKSLSRLIYDEINLEYLKACGLNFVETSENLITLKNLKTPLKDEVFSFIDLETTGSC
PIKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYIAELTGIAYEDTLNAPSVHEALQEL
RLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNLKLCTLDLSKRAILSMRYSLSFLKE
LLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKTTMDLIDFSKCANTLIKRPPRSRHQ
ETPPPFSLFERTKGLLNIIKATS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatatctttgaactccaacaagcgggcgtggatgtggtggtttcagggagtt
atatttttaaatctaaagatcgtaagctggctattgaaggcttacagaatgccaataaat
ctcttgcataaagatattcaagccctaatcgctcgcttaaagcaccaggatttaagcttg
ggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaatttggaatattta
aaagcgtgcgggcttaatttcgtagaaacgagtgaaaatttaatcacgctcaaaaacctt
aaaaccccccttaaagatgaggttttttcctttattgatttagagaccaccggctcttgc
cccataaaacatgagattttagaaatcggagccgtgcaagtgaaggggggggaaattatt
aatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatcgctgagcttaca
ggcatcgcttatgaagacaccctaaacgccccaagcgtgcatgaagctttgcaagaattg
cggctttttttaggcaatagcgtgtttgtggcccacaacgctaattttgattacaacttt
ttagggcgttattttgtagaaaaattgcattgccccttattgaatttaaagctttgcact
ttggatttatccaaacgagccattttatccatgcgttattctttgagctttttaaaagag
cttttagggtttggcatagaagtcagccacagagcctatgcggacgctttagcgagctat
aaactctttgaaatatgcctgttaaacttgcctagctacatcaaaaccacaatggatttg
attgatttttccaaatgcgctaacactctcatcaaaagacccccaagatccagacaccaa
gagactccaccgccgttttctctttttgaaaggacaaagggtttgttgaatatcataaaa
gcaaccagttaa
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