Helicobacter pylori P12: HPP12_1531
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Entry
HPP12_1531 CDS
T00786
Symbol
pcrA
Name
(GenBank) ATP-dependent nuclease subunit A
Organism
hpp
Helicobacter pylori P12
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Cas_Cas4
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACJ08677
UniProt:
B6JP49
LinkDB
All DBs
Position
1624603..1627443
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AA seq
946 aa
AA seq
DB search
MDTKRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATAEMKERILDYL
KILQKENLENEKEKSQNILKELEEKYHLDPSLVRNSAPKIYQRFLNAEIRISTIDAFFQS
ILRKFCWFVGLSANFEVNEDTKAHQQQLNEGFLSALNGEQLEELSVFIAQCLSYDSYTSD
SVLERLRFLKNKLYLFDPNKKEPAFDEEGFLEKLRNLNQQIQSVETASDTAKKAIKCDDF
RGFLNSSLTWLKKKGEYRDFKKLKDEIPTLESECEEIENDLKRYYEAREIALFKKFPKFI
QLYNKATSKIQALDFDAIKDKVHVLLNGYEEMPAEFFYFRLDSKIAHILIDEFQDTSLND
YKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYAFRGSFSSLFESVSKDFYHDNLEFN
HRSAPLIINYVNTIFKKAYQNSPTAYLEQKYPKTSQNKHATEGYVKVSLVADERELLLEQ
ILQEAQNLLEHHIDPKDITILCATNKDALEIKNYLQERLSAIRPSTESSAKLSQFVESKI
IKNALEYALAEEPYKPFYKHSVLKLAGYLHDDAIALPGFNPKKESVAGFVWKVMELFELY
GEPAQICLELAVGCEDANDFLEKLEAKAIASFNAKGAQIMTIHKSKGMQFPYVIVCERLG
NPKSNHSNQLLEEYNGAELMHLYYRMKNREVVDKDYARALDKEEAAKDHEETNVYYVAFT
RAELGLIVVAKDKKESKKENKNKTMHEKLDLALLEEGEIMPVISPQKEPLITSTLIKPHA
YGEQVQEIEEEPESDYEKNNDQEAINFGIALHKGLEYQYAYNIPKQSVLEYLNYHHGFYG
LDHQALEESLELFENDMEIQTLFKNHALKGEAAFLFQGVVSRIDVLLWDKGQNLCVLDYK
SSQNYQQSHKAQVSHYAEFLKTQAPHFKIQAGIIYAHKRLLEKLWV
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaaacgacaatgcatggctttaaaggcttcagcagggagtgggaagactttc
gctttgagcgtgcggtttttggccctattgtttaagggggctaatcctagcgagatttta
acgctcactttcactaaaaaagccaccgccgaaatgaaagagcgcattttagactattta
aaaattttgcaaaaagaaaaccttgaaaatgaaaaagaaaaatcccaaaatatcctgaaa
gaattagaagaaaaataccatttagaccctagtttggtgcgaaatagcgctccaaaaatc
taccaacgctttttaaacgccgaaatcagaatcagcaccattgacgcgttttttcaaagc
attttaaggaaattttgctggtttgtggggttgagcgcgaattttgaagtcaatgaagac
accaaagcgcaccaacaacagcttaatgagggttttttgagcgctttaaatggcgaacag
cttgaggaattgagcgtttttatcgctcaatgcttaagttatgatagttacacaagcgat
tctgttttagagcggctgcgttttttaaaaaacaagctctatttatttgatcccaataag
aaagagcctgcatttgatgaagagggttttttagaaaaactaagaaacttaaaccaacag
attcaaagcgtagaaacagcgtcagatacggctaaaaaagccattaaatgcgatgatttt
agggggtttttaaacagctctttaacctggcttaaaaaaaagggtgaataccgcgatttc
aaaaaactcaaagatgaaatccccactttagagagcgaatgcgaagagattgaaaacgat
ctaaaacgctattatgaagccagagagatcgcattatttaaaaaattccctaaattcatc
cagctttataataaagccacttctaaaatccaagccctagattttgatgcgattaaagac
aaggttcatgtcttattgaatggttatgaagaaatgccggcggagtttttttatttcagg
ttggacagcaagatcgcacacattttgattgatgaatttcaagacacgagcttgaacgat
tataagattttagccccttttattgatgagattaaagccgggatagggcaagcgaaatgg
cacagaagcgtgttttttgtgggcgatgtcaagcagagcatttatgcctttagggggagt
tttagttccttgtttgaaagcgtttctaaggatttttaccacgataatttggaattcaac
caccgcagtgcgcctttaatcattaattatgtgaacaccatttttaaaaaagcttatcaa
aattcccccaccgcttatttggagcaaaaataccctaaaacttctcaaaataaacatgct
acagagggctatgttaaagtctctttagtggctgatgaaagagaattgttgttagaacaa
atcttacaagaagcccaaaaccttttagagcatcatattgatcctaaagacattaccatt
ttatgcgccaccaataaggacgctttagaaatcaaaaattatttgcaagagcgtttgagt
gcgattcgcccaagcacggaatctagcgcgaaattgtctcaatttgtagagtctaaaatc
attaagaacgctttggaatacgctctagcggaagaaccttacaagcccttttataagcac
agcgttttaaaactcgccggatacttgcatgatgatgcgatcgctttacctggttttaac
cctaaaaaagagagcgtggcaggctttgtgtggaaggtgatggaattgtttgagctttat
ggagagcctgcacaaatctgcctagaattagcggttgggtgcgaagacgccaatgatttt
ttagaaaaattagaggctaaagcgatcgcttctttcaatgcaaaaggcgcacaaatcatg
accattcacaaatctaaaggcatgcaattcccttatgtgattgtgtgcgaacgcttgggc
aatcctaaatcaaatcactccaatcaactccttgaagaatataacggcgcagagcttatg
cacctttactacagaatgaaaaatcgtgaggtggtggataaagattacgctagggcttta
gacaaagaagaagcggccaaagatcatgaagaaaccaatgtgtattatgtcgcattcact
agggctgagttaggattgattgtcgtggctaaagacaaaaaagaaagcaaaaaagaaaat
aaaaacaaaacaatgcacgaaaaattggatcttgcgcttttagaagagggggaaattatg
ccggttatttctccacaaaaagagcctttaattacaagcactctcatcaagccccatgcc
tatggcgagcaagtccaagaaatagaagaagagccagagagcgattatgaaaagaataac
gaccaggaagcgatcaattttggtatcgctttgcacaagggattagaataccaatacgct
tacaacattcctaaacaaagcgttttagaatatttaaactaccaccatggtttttatggt
ttggatcaccaagcgttagaagaaagtttagagctttttgaaaacgatatggaaatacaa
actctttttaaaaatcatgccttaaagggcgaagcggcttttttattccaaggggttgtg
tctaggattgatgttttgttgtgggataaggggcaaaatttgtgtgttttagattataaa
agctctcaaaattaccaacaaagccataaggctcaagtgtctcattacgctgagtttttg
aaaactcaagccccccattttaagatacaagcgggcattatttacgctcataaaagactg
cttgaaaaattatgggtttga
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