Helicobacter pylori 2017: hp2017_0228
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Entry
hp2017_0228 CDS
T01913
Symbol
radA
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
hpq
Helicobacter pylori 2017
Brite
KEGG Orthology (KO) [BR:
hpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpq03400
]
hp2017_0228 (radA)
DNA repair and recombination proteins [BR:
hpq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
hp2017_0228 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
ChlI
Lon_C
AAA_24
NTPase_1
AAA_14
Rad51
AAA_16
RecA
AAA_31
ATPase_2
ABC_tran
SLFN-g3_helicase
NACHT
nSTAND3
AAA_22
CbiA
DUF7129
DAP3
ArsA_ATPase
zf-C2H2_7th_ZNF462
AAA_5
NPHP3_N
Zeta_toxin
GvpD_P-loop
SRP54
AAA_30
MeaB
RsgA_GTPase
AAA
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADZ49310
LinkDB
All DBs
Position
222633..223979
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AA seq
448 aa
AA seq
DB search
MAKKTSLFECQHCGFTSPKWLGKCVQCNAWESFIELNQTQKEVLNALKIPLPQAQKSVSI
AEIEHEEVIKFSSTQSELDIVLGGGIAKGGLYLVGGSPGVGKSTLLLKVASGLAKNQQKV
LYVSGEESLSQIKMRATRLDCIEKELYLLNEINWPVIKANMESENYFACVIDSIQTLYSP
EISSAPGSISQVREITFELMRLAKTRDIAIFIIGHITKEGSIAGPRVLEHMVDSVLYFEG
DPSRELRILRSFKNRFGPTSEIGLFEMKEQGLVSAKEASSLFFSKEEPMEGSAITITLEG
SRALILEIQALVSECSFGAPKRLANGFDTNRLNMLIALLEKKLEIPLNRHDVFINVSGGI
KISEPACDLAVIASILSSFKNRKIDNKTAFLGEVSLNGRILEAPNLNARLKEMENYGFLK
AILPKKPSQKTSIKCYEANVVGKIVEWM
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaaaacttctttatttgagtgtcagcattgtggttttacaagccctaagtgg
ctaggaaagtgcgttcagtgcaacgcatgggagagctttatagaattgaaccaaacccaa
aaggaagttttaaacgcgcttaaaataccgctcccacaagcgcaaaaaagcgtttctatc
gctgaaattgagcatgaagaagtcatcaagttttcttccactcaaagcgaattggatatt
gttttaggtggggggatcgctaaaggggggctgtatttagtgggagggagtcctggggtg
gggaaatccactctgcttttaaaagtggcttctggcttagccaaaaaccagcaaaaggtt
ttgtatgtgagcggggaagagagcttgagccagattaaaatgcgcgccactagattggat
tgcatagaaaaagaattgtatctgctcaatgaaatcaattggcctgtgattaaggctaat
atggagagcgaaaattattttgcttgcgtgattgattccatccaaacgctttattcacca
gagatttcttcagcccccggctctatttcgcaagtgcgagagatcacttttgagctcatg
cgtttggccaaaacaagagatattgctatttttatcatcggtcatatcactaaagaaggg
agcatcgcagggcctagagtgctagagcatatggtagatagcgtgctgtattttgaaggc
gatcccagtagggaactaaggattttaaggagttttaaaaaccgctttggccctacgagt
gaaatcggcttgtttgagatgaaagagcagggtttggtgagcgccaaagaggcttcaagc
ttgtttttttctaaagaagagcctatggaagggagcgcgattaccatcactttagaaggc
tcaagggcgttgattttagaaatccaggcgttggtgagcgagtgcagtttcggggcgccc
aaacgattagcgaacgggtttgacactaaccgccttaacatgctcatcgctttattggaa
aaaaagctagaaatccccttaaaccgccatgatgtgttcattaatgtgagcggaggcatt
aagattagcgagccggcttgcgatttagcggtcattgccagtatcctttcaagctttaaa
aacagaaaaattgacaataaaacggcgtttttgggcgaagtgagtttgaatggcaggatt
ttagaagcccctaatttgaacgctagattgaaagaaatggaaaattacggctttttaaaa
gccattttgcccaaaaaacccagtcaaaaaacctctatcaaatgctatgaagccaatgtg
gtgggtaagattgttgagtggatgtga
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