Helicobacter pylori 2017: hp2017_0254
Help
Entry
hp2017_0254 CDS
T01913
Symbol
deaD
Name
(GenBank) ATP dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
hpq
Helicobacter pylori 2017
Pathway
hpq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
hp2017_0254 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpq03019
]
hp2017_0254 (deaD)
03009 Ribosome biogenesis [BR:
hpq03009
]
hp2017_0254 (deaD)
Messenger RNA biogenesis [BR:
hpq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
hp2017_0254 (deaD)
Ribosome biogenesis [BR:
hpq03009
]
Prokaryotic type
rRNA helicases
hp2017_0254 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
P-loop_SecA
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ADZ49336
LinkDB
All DBs
Position
245784..247259
Genome browser
AA seq
491 aa
AA seq
DB search
MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERAEAIMRLLDTQAPEKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRSSI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS
QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPPNKKTQHEPAHSFKKGQHRDKHPK
TNRYSKKPKRR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaatcaaccaccactccctacagaaattgacgatgacgcttatcataagcct
agttttaatgatttgggcttaaaagaatcggttttaaaatccgtttatgaagccggcttc
acttccccaagccccattcaagaaaaggccattccggctgttttacaaggccgagatgtc
atcgcgcaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacaccatagaggccttagtgatcacgcccactagagaattagcc
atgcaaattagcgatgagatttttaaattgggcaaacacaccaggactaaaaccgtgtgc
gtgtatggaggccagagcgttaaaaaacaatgcgaattcattaagaaaaacccccaagtg
atgatcgccacgccaggaaggctgttggatcatttaaaaaacgagcgcatccataaattt
gtgcctaaagtggtcgttttagatgaaagcgatgaaatgctggatatgggatttttagac
gacattgaagagatttttgactacctccctagcgaagcgcagattttgcttttttcagcc
acgatgccagagccgatcaaaaggctagcggataagattttagaaaaccctattaaaatc
catattgccccctctaatatcactaacaccgacatcacccaacgcttttatgtgatcaat
gagcatgaaagggctgaagcgatcatgcgccttttagacacccaagcgcctgaaaagagc
atcgttttcacgcgcaccaaaaaagaggccgatgaattgcaccaattccttgcttctaaa
aattacaaaagcaccgccttgcatggggatatggatcaaagggatcgccgctcttctatc
atggcgtttaaaaaaaatgacgctgatgtgttggtggctacggatgtggcgagccgtggg
ctagacattagcggtgtaagccatgtgtttaattaccacttgcccctaaacactgagagc
tatatccatcgcattgggagaaccgggcgagcgggcaaaaaaggcatggcgatcacttta
gtaacccctttagaatacaaagagcttttacgcatgcaaaaagaaattgattcagagatt
gaactttttgaaatccccaccattaacgaaaatcagatcatcaaaaccttgcatgacgct
aaagtgtctgaagggatcatcagcctttatgaacagcttaccgaaatttttgagccgtct
caattggttttaaaacttttgagtttgcagtttgaaaccagtaaaattggcttgaaccag
caagaaattgatgcgattcaaaaccctaaagaaaaaacgccaaaacccccaaacaaaaaa
acgcagcacgagccagcacactcttttaaaaagggtcagcacagagacaaacaccccaaa
acgaatcgttattctaaaaaacccaaacgccgttaa
DBGET
integrated database retrieval system
