Helicobacter pylori 2017: hp2017_0257
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Entry
hp2017_0257 CDS
T01913
Symbol
oppD
Name
(GenBank) Oligopeptide transport ATP-binding protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
hpq
Helicobacter pylori 2017
Pathway
hpq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
hp2017_0257 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpq02000
]
hp2017_0257 (oppD)
Transporters [BR:
hpq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
hp2017_0257 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_16
AAA_29
nSTAND1
AAA_22
AAA_13
nSTAND3
Sigma54_activat
MMR_HSR1
RsgA_GTPase
DUF87
ATP-synt_ab
Dynamin_N
ABC_ATPase
G-alpha
AAA_15
IstB_IS21
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ADZ49338
LinkDB
All DBs
Position
complement(248996..250546)
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AA seq
516 aa
AA seq
DB search
MLEIKNLNCVLNPHFSLQNINISLSYGERVAIVGESGSGKSSIANLIMRLNPRFKPHNGE
ILFETTNLLKESEAFMQHLRGNIIAYIAQDPLSSLNPLHKIGKQLSEAYFLHHKNASQTL
LKEQVLNAMKQVQLDEKFLDRYPYELSGGQRQRVCIAMGIINAPKLLICDEPTTALDAQI
QNQILDLLKQLSVEKNIALLFISHDLKAVKRLADRVYVLKKGEIVETNSTKELFKDPKHE
YSKLLIQASNLPAKNLKALDETLLEVKDFSVYYLQKRFFKSSLKKPLIASVNFSLKAKEN
IGIIGESGSGKSSLALGLLKLALNSGEEKILGQSVGLLNSKAFKPYRKILQMVFQDPYAS
LNPRLSIQSILIEALRFAYPKASKEEWHHLAELCLEEVCLNHELLNFYAYELSGGERQRV
AIARAIALKPKIILLDEPTSALDKSIQKSVLELLLNLQEKQDLSYLFISHDLDVIKAFCD
RVLVVSEGKIVETGAIEEVFDNPKHAYTKRLLESRL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaatcaaaaacttgaactgcgttttaaaccctcatttttcgctccaaaacatt
aatatttctttaagttatggtgaaagggtggcgatcgtgggcgaaagcgggagcgggaaa
agctctatcgctaatctcatcatgcgattaaaccctagattcaagccccataatggcgaa
attctgtttgaaacaaccaatcttttaaaggaaagcgaagcgttcatgcagcatttaagg
gggaatattatcgcttacatcgctcaagaccccctatccagcctaaaccccttgcataaa
atcggcaagcaactgagtgaagcctatttcttacaccataaaaacgcttctcaaacgctc
cttaaagaacaagttttaaacgccatgaaacaagtccaattagatgaaaaatttttggat
cgttacccttatgaactcagcggagggcaacgccaaagggtgtgtatcgctatgggcatt
attaatgcgcccaaactgctcatttgcgatgagcctaccaccgcgctagatgcgcaaatc
caaaaccagattttagacttgctcaagcaattgagcgtggaaaaaaacatcgccctttta
ttcattagccatgatttaaaggcggtcaaacgattggctgatagggtttatgtgttaaaa
aaaggcgagatagtagaaaccaattccaccaaagagctttttaaagaccctaagcacgaa
tattcaaaactcttgattcaagcttcaaacttgcccgctaaaaacttaaaagcactagat
gagacgcttttagaggtgaaagattttagcgtttattacttgcaaaaacgcttctttaag
tcttctttaaaaaagccccttatcgcatcagtcaatttttccctcaaagctaaagaaaac
atcggcatcattggcgaaagcgggagtgggaaaagctctttagcgttagggcttttaaaa
ctcgctctaaacagcggggaagaaaagattttaggccaaagcgtggggcttttaaattct
aaggcgttcaaaccctaccgcaagattttgcaaatggtgtttcaagacccctacgcatca
ttaaaccctcgcttaagcattcaaagcattttaatagaagctctgcgctttgcttaccct
aaagcttccaaagaagaatggcaccatttagctgaactttgcttagaagaagtgtgttta
aaccatgaattgcttaacttttacgcttatgaactcagcggaggggaacgccaaagagtg
gcgatcgctagagcgattgccttaaaacctaaaatcattcttttagatgagccaacctct
gctttagacaaaagcattcaaaaaagcgtgttggaattattgttgaatttacaagaaaag
caagacttgagctatttgtttatcagccatgatttagatgtgatcaaagcgttttgcgat
agggtgttagtggtgagtgaggggaaaatcgtagaaacaggcgctattgaagaagtgttt
gacaaccctaagcatgcttatacgaagcgtttgttggagtctaggctttaa
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