Helicobacter pylori 2017: hp2017_0420
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Entry
hp2017_0420 CDS
T01913
Symbol
fliA
Name
(GenBank) Flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
hpq
Helicobacter pylori 2017
Pathway
hpq02020
Two-component system
hpq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
hp2017_0420 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
hp2017_0420 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpq03021
]
hp2017_0420 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hpq02035
]
hp2017_0420 (fliA)
Transcription machinery [BR:
hpq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
hp2017_0420 (fliA)
Bacterial motility proteins [BR:
hpq02035
]
Flagellar system
Flagellar assembly proteins
Stator
hp2017_0420 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0122
Sigma70_r3
MarR
MarR_2
TetR_C_44
KORA
HTH_34
DUF3209
HTH_10
HsdM_N
DUF4202
DUF7440
Motif
Other DBs
NCBI-ProteinID:
ADZ49506
LinkDB
All DBs
Position
412557..413300
Genome browser
AA seq
247 aa
AA seq
DB search
MPKGIQKTEASEKSIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLKERLPSSIDFND
LVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRSSRKLIKSIDIE
ITKYLNEHGEEPSDAYLAEVLGENIEKIREAKTASDIYALVPIDEQFNAIEQDEITQKIE
AEELLEHVQKVLNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIKEVIKKVRQ
SLGVDHG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaggaattcaaaaaactgaagcgagcgaaaaaagtatagaaaaggttttgaac
gcctatgacaagcaacaacaccaccatcaagacgcgctcgctatccagtatctaccggcc
gtgcgcgctatggcgtttcgtttaaaagagcgtttgcccagctctattgattttaacgat
ctggtttctattggcactgaagagttgattaaattagccaggcgttatgagagcgcgtta
aacgattctttttgggggtatgctaaaacgcgcgtcaatggggcgatgttagattatttg
cgttctttagatgtgatttctcgctctagcaggaagttgattaaaagcattgatattgaa
atcaccaaataccttaatgagcatggggaagagcctagcgatgcgtatttagcggaagtt
ttaggcgaaaatattgaaaagattagagaagccaaaacggcctcagatatttatgcgtta
gtgcctatagatgagcaattcaatgcgattgagcaagatgaaatcactcaaaagattgaa
gcagaagagttgttagagcatgtccaaaaagtattgaatcaaatgagcgaacgagagcaa
atccttatccagctctattactttgaagagttgaatttgagcgagatcaaagagatttta
ggcattactgaatcgcgcatttctcaaatcattaaagaagtgattaaaaaggtgcgccaa
tccttaggagtggatcatggctga
DBGET
integrated database retrieval system
