Helicobacter pylori 2017: hp2017_0690
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Entry
hp2017_0690 CDS
T01913
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hpq
Helicobacter pylori 2017
Pathway
hpq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
hp2017_0690 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpq03400
]
hp2017_0690 (uvrA)
DNA repair and recombination proteins [BR:
hpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
hp2017_0690 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
hp2017_0690 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
nSTAND3
AAA_16
DnaJ_CXXCXGXG
AAA_21
APS_kinase
SLFN-g3_helicase
Viral_helicase1
AAA_23
AAA_15
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
ADZ49785
LinkDB
All DBs
Position
complement(706403..709228)
Genome browser
AA seq
941 aa
AA seq
DB search
MQHKTIMDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYL
ESLSSYARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFAR
VGEQFCPTCLEPISSMSASDIISQICHLEENSKIIILAPIIKDKKGSFNDKLESLRLKGY
VRAFVDGVMVRLDEEIHLHKTKKHTIEAVVDRVVINSENSSRIASAVEKALKESYGELEV
EILQDNAPSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISK
ILDPNTPLNQGAIKVIFGYNRSYYAQMFEGFCAYNGIDSALCFNELNKEQQDALLYGNGT
EISFHFKNSPLKRPWKGIIQIAYDMFKEQKDLSDYMSEKTCSSCKGHRLKASSLSVQVAG
LKMADFLTKPIEEVYHFFNDPTHFSYLNEQEKKIAEPILKEILERVFFLYDVGLGYLTLG
RDARTISGGESQRIRIASQIGSGLTGVLYVLDEPSIGLHEKDTLKLINTLRNLQKKGNTL
IVVEHDKETIKHADFVVDIGPKAGRHGGEVVFSGSVKELLQNNHSTALYLNGTKKIERPK
FEPPKEKHFLEIKNVNINNIKNLSVQIPLKQLVCITGVSGSGKSSLILQTLLPTAQTLLN
HAKKTQSLNGVEIVGLEHLDKVIYLDQAPIGKTPRSNPATYTGVMDEIRILFAEQKEAKI
LGYSASRFSFNVKGGRCEKCQGDGDIKIEMHFLPDVLVQCDSCKGAKYNPQTLEIKVKGK
SIADVLNMSVEEAYEFFAKFPKIAVKLKTLIDVGLGYITLGQNATTLSGGEAQRIKLAKE
LSKKDTGKTLYILDEPTTGLHFEDVNHLLQVLHSLVALGNSMLVIEHNLDIIKNADYIID
MGPDGGDKGGRVIASGTPLEVAQNCEKTQSYTGKFLALELK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacataaaaccattatggataagatcattattcaaggggctagggaaaacaatctc
aaaaatatttttttagaaatccctaaaaaccagtttgttgtttttaccggattgagcggt
tcgggtaaatccactctggcgtttgacaccttatacgctgaaggccaaaggcgctattta
gagagtttgtctagctatgcgaggcaatttttagacaaagtgggtaagcctaatgtggat
aaaattgaaggcctaacccctgcgattgctattgatcaaaaaaccacttctaaaaaccct
agatccactgtggggacgatcactgagatttatgattatttaaggttgctgtttgcaagg
gttggggagcaattttgccccacatgtttagagcctattagttctatgagtgcgagcgat
atcatttctcaaatctgtcatttagaagaaaattctaaaatcattattctcgctcccatt
attaaagataaaaaaggttcgtttaacgataaattagagagcttgcgtttaaaggggtat
gtgagggcttttgttgatggggtgatggtgcgtttagatgaagaaatccatttgcacaaa
accaaaaaacacaccattgaagcggtggtggatagggtggttatcaatagcgaaaattct
tcacggatcgctagcgcagtagaaaaagcccttaaagaaagctatggggaattagaagtg
gaaatcttgcaagacaacgcgccaagtattaggaagcattacagcgagcataaggcatgt
tttaagtgtaagatgagttttgaagaattagagcctttgagtttttccttcaattcgcct
aaaggggcgtgcgaaagttgcttgggtttggggacaaaatttagcttagatattagtaag
attttagatcctaacacgcctttaaatcaaggagcgatcaaagtgatttttgggtataac
cgcagttattacgctcaaatgtttgaaggcttttgtgcttataatggcattgacagcgcg
ctttgtttcaacgaattgaacaaagagcagcaagacgctcttttgtatgggaatggcact
gaaatcagctttcattttaaaaacagccccttgaaacgcccttggaaaggcattatccaa
atcgcttatgacatgtttaaagagcaaaaggatctgagcgattacatgagcgaaaaaacc
tgttcttcatgcaaggggcatcgtttgaaagcctcaagtctaagcgtccaagtcgctggc
ttgaaaatggcggattttttaactaagcccattgaagaagtctatcatttttttaatgat
cccacgcattttagctatcttaacgagcaagaaaaaaagatcgctgaaccgattttaaaa
gagattttagaaagggtgttttttttatacgatgtggggctagggtatttgactttaggg
agggatgcgcgaacgattagcggaggggagagccaaaggatacgaatcgccagtcaaatc
gggagtggcttgacaggggttttgtatgttttagacgagcctagcattggcttacatgaa
aaagacacgctcaaactcatcaacacccttaggaatttacaaaaaaaggggaacacgctc
attgtcgtagagcatgataaagagacgattaagcatgcggattttgttgtggatattggg
ccaaaggctggaaggcatgggggtgaagtggtctttagcgggagcgtgaaagagttattg
caaaataaccattctaccgctttgtatctcaacggcactaaaaagattgagcgccccaaa
tttgaaccccctaaagaaaagcattttttagaaattaaaaatgtcaatatcaataacatt
aagaatttgagcgttcaaatccccttaaaacaattggtgtgcattacgggggtgagcggg
agcggtaaaagctcgctgatcttacaaacccttttacccaccgctcaaacccttttaaac
catgctaaaaaaactcaaagcttgaatggggtggagattgtagggttggagcatttggat
aaagtgatttatttagaccaagcccccataggcaaaaccccacgaagcaaccctgccact
tacacaggagtgatggatgaaatcaggattttatttgccgaacagaaagaagctaaaatt
ttaggctatagcgcgagccgttttagttttaatgtgaaaggggggcggtgcgagaaatgc
caaggcgatggggatattaaaatagaaatgcattttttgcctgatgtgttggtccaatgc
gatagctgtaagggcgctaaatacaacccccagactttagaaatcaaggtgaaaggcaaa
tccattgccgatgtgttgaacatgagcgtggaagaggcttatgaattttttgctaaattt
cctaaaatcgccgtgaagttaaaaacgcttatagatgtgggcttgggctatatcacttta
gggcaaaacgctaccactttaagcgggggggaggctcaaaggatcaaattggctaaagaa
ttgagtaaaaaagacacaggcaaaaccctttatattttagatgagcctaccaccggtttg
cattttgaagacgtgaatcaccttttacaggttttgcattctttagtggcgttaggcaat
tccatgctagtgattgagcataatttagacattatcaaaaacgctgattacattatagac
atggggcctgatgggggggataagggcgggagagtcattgcgagcggcacgcctttagaa
gtggcacaaaattgcgaaaaaacccaaagctacacgggaaaatttttagctttggaattg
aaatag
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