Helicobacter pylori 2017: hp2017_1066
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Entry
hp2017_1066 CDS
T01913
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hpq
Helicobacter pylori 2017
Pathway
hpq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
hp2017_1066 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpq03400
]
hp2017_1066 (uvrB)
DNA repair and recombination proteins [BR:
hpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
hp2017_1066 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
hp2017_1066 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_7
Microtub_bd
SWI2_SNF2
DUF5923
AAA_22
UBA
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADZ50176
LinkDB
All DBs
Position
complement(1086392..1088368)
Genome browser
AA seq
658 aa
AA seq
DB search
MPLFDLKSPYPPAGDQPKAIEALTKSLKNNNHYQTLVGVTGSGKTYTMANVIAQTNKPTL
IMSHNKTLCAQLYSEFKAFFPHNRVEYFISHFDYYQPESYIPRRDLFIEKDSSINDDLER
LRLSATTSLLGYDDVIVIASVSANYGLGNPEEYLKVMEKIKVGEKRAYKSFLLKLVEMGY
SRNEVVFDRGSFRATGECVDIFPAYNDAEFIRIEFFGDEIERIAVFDALERNEIKRLDSV
MLYAASQFAVGSERLNLAIKSIEDELALRLKFFKEQDKMLEYNRLKQRTEHDLEMISATG
VCKGIENYARHFTGKAPNETPFCLFDYLGIFEREFLVIVDESHVSLPQFGGMYAGDMSRK
SVLVEYGFRLPSALDNRPLKFDEFIHKNCQFLFVSATPNKLELELSQKNVAEQIIRPTGL
LDPKFEVRDSDKQVQDLFDEIKSVVARGERVLITTLTKKMAEELCKYYAEWGLKVRYMHS
EIDAIERNHIIRSLRLKEFDVLIGINLLREGLDLPEVSLVAIMDADKEGFLRSETSLIQT
MGRAARNANGKVLLYAKKITQSMQKAFEITSYRRTKQEEFNKIHNITPKTVTRALEEELK
LRDDEIKIAKALKKDKMPKSEREKIIKELDKKMRECAKNLDFEEAMRLRDEIAQLRTL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatttgatttaaaaagcccttatccaccagcaggcgatcagcccaaagccata
gaagctttaacgaaaagcttgaaaaataacaaccattatcaaactctagtgggggttaca
gggagcggtaagacttacacgatggctaatgtcatcgctcaaaccaataagcctactttg
atcatgagccataataagaccttatgcgcgcagctttatagcgagtttaaggcgtttttc
ccgcataatagggtggagtattttatctcccactttgattactaccagcctgaaagctat
atccctaggagggatttattcattgaaaaagacagctctattaacgatgacttggagcgt
ttgagattgagcgcgaccacctcgcttttaggttatgatgatgtgattgtgatagcgagc
gtttcggctaattatggtttgggtaaccctgaagaatatttaaaagtcatggaaaaaatc
aaagtgggcgagaagcgcgcttacaagagctttttattaaagctagtggaaatgggttat
agccgtaatgaagtggtgtttgatagggggagctttagagcgacgggggaatgcgtggat
attttccccgcttataatgacgctgaatttattaggattgaattttttggcgatgagata
gaaaggattgctgtctttgacgctttagaaagaaatgaaatcaagcgcttggattctgtc
atgctttatgcggccagtcagtttgctgtagggagtgagaggttgaatttagccattaaa
agcattgaagatgaactcgctctaagattgaaattttttaaagagcaggataaaatgctt
gaatacaaccgcctcaaacaacgcaccgagcatgatttagaaatgattagcgcgaccggt
gtgtgtaagggcattgaaaattacgcacgccattttacgggtaaagcccctaacgaaacg
cctttttgtttgtttgattatttagggatatttgagcgggagtttttagttattgtagat
gaaagccatgtgagtttgccgcaatttggagggatgtatgcaggggatatgagcaggaaa
agcgttttagtggaatacggctttagattgcctagcgctttagacaaccgccctttaaag
tttgatgaatttatccataaaaattgccagttcctttttgtgtccgctacgcccaataag
ctagaattagagctttctcaaaagaatgtcgctgagcaaatcattcgccctacagggctt
ttagaccctaaatttgaagtgcgagacagcgataagcaagtccaggatttgtttgatgaa
atcaagtcagtggtggctagaggtgaaagggtgctcatcaccacgctcactaaaaaaatg
gcagaagaattgtgtaaatattatgctgaatggggcttgaaggtgcgttacatgcatagt
gaaattgatgcgattgaaaggaatcacattatccgctctttaaggcttaaagaatttgat
gttttaatagggatcaatcttttaagagaggggctggatttgcctgaagtctctttagta
gcgatcatggatgcggataaagaagggtttttaaggagtgaaacaagcctcattcaaacc
atggggcgagccgctagaaacgctaatggtaaggttttattatacgctaaaaagatcact
caaagcatgcaaaaagcctttgaaatcacgagttacaggcgcaccaagcaagaagagttt
aataaaatccataacatcacccccaaaaccgttacgcgcgctttagaagaggagttgaaa
ttaagagacgatgaaatcaaaatcgctaaagctttaaaaaaggacaaaatgcctaaaagc
gaaagggaaaaaatcattaaagaattggataaaaaaatgcgagagtgtgcgaaaaatttg
gattttgaagaagcgatgcgtttgagagacgaaatcgctcaattaagaacgctttaa
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