Haemophilus parainfluenzae: PARA_01900
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Entry
PARA_01900 CDS
T01605
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hpr
Haemophilus parainfluenzae
Pathway
hpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PARA_01900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpr03019
]
PARA_01900
03009 Ribosome biogenesis [BR:
hpr03009
]
PARA_01900
Enzymes [BR:
hpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PARA_01900
Messenger RNA biogenesis [BR:
hpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PARA_01900
Ribosome biogenesis [BR:
hpr03009
]
Prokaryotic type
rRNA helicases
PARA_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CBW14297
UniProt:
A0AB33QJ43
LinkDB
All DBs
Position
186834..188684
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AA seq
616 aa
AA seq
DB search
MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQACIPALLEGRDVLGMAQTGSGKTAAFS
LPILAKIDPAAKHPQLLVMAPTRELAIQVADACEHFMKYAKGINIVTLYGGQRYDIQLRA
LKQGAQVVVGTPGRILDHIRRNTLDLSELKAIVLDEADEMLRMGFIDDVETVMAELPEEH
QTALFSATMPEPIRRITKRFMNNPQEVKIKVNNDNAPDIEQNCWYVQGFRKNDALLRFLE
VEDFDAAIIFTRTKTGTLDVTELLEKHGFRAAALNGDMTQQLREQTLDRLRNGSLDIVVA
TDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNIE
HLMKKPINEVELPNHEVLQACRRKKFQDKITKQLEHHDLEMYRSLLEDLFTADQDQEDIA
AAMLMLLQGKQKLILPPDPPMDKRRRDRNDRGDRRENPRSAERRGERKGYGTPQPMDLYR
IEVGRADGVEVRHIVGAIANEGDINSRYIGHIKLYDDYSTVELPQGMPKELLQQFGKTRV
LNKQMQMSFMGAVQSDSGRSGNDFGGKGRRDGRRNDRGERGQDRFRGERNGERRQRKFND
KNDRTFNERGRRDRQR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaaaatcacttttaatgatttaggcttgcctgaattcattctaaaagccgtt
tctgaccttggttttgaaacaccttcgccaatccaacaagcttgtattcctgctcttcta
gaaggcagagatgtacttggcatggcgcaaaccggtagtggtaaaactgccgcattctct
ttacctattttggcaaaaattgatcctgccgcaaaacatccacaattattggtgatggca
ccaacgcgtgaacttgccattcaagttgctgatgcttgtgaacactttatgaaatatgcc
aaaggcatcaacatcgtgaccctttatggaggtcaacgttatgacatccaattacgtgca
ttaaaacaaggcgcacaagttgttgtgggtacaccaggtcgtattttggatcacatccgt
cgtaacacattagatctatctgagttaaaagctatcgtacttgatgaagcagatgaaatg
cttcgcatgggctttattgatgatgtagaaaccgttatggctgaattacctgaagagcac
caaactgcgcttttctcagccaccatgcctgagccaattcgtcgtatcacaaaacgcttc
atgaacaacccgcaagaagtaaaaatcaaagtaaataacgataatgcgcctgatattgag
caaaattgttggtatgttcaaggtttccgtaaaaatgatgcattattacgtttcttagaa
gtagaagattttgatgcggcaatcatttttactcgcactaaaacaggcacacttgatgtg
actgaattattagaaaaacacggtttccgtgctgcggcattaaacggtgatatgactcag
caattacgtgagcaaaccttagatcgcttacgtaatggtagccttgatattgtggttgca
accgatgttgctgcgcgcggtatcgatattgaaagaatcagtcttgtagtgaactatgac
atcccacttgatgcagagtcttacgttcaccgtatcggccgtaccggtcgtgcaggtcgt
tctggtcgtgcattattattcgttgaaccacgtgaacgccgtttactccgtaatatcgaa
cacttgatgaaaaaaccaatcaatgaagttgaattaccaaatcatgaagtgttgcaagcc
tgtcgtcgtaaaaaattccaagacaagattaccaaacaattggaacatcatgatcttgaa
atgtatcgtagcctattggaagatttattcacggcagatcaggatcaagaagatattgct
gcggcgatgttgatgttgcttcaaggaaaacaaaaactcatccttccaccggatccacca
atggataagcgtcgtcgtgaccgtaatgatcgcggtgatcgtcgtgaaaacccacgttca
gctgaacgtcgtggtgaacgtaaaggctatggcaccccacaaccgatggatttatatcgt
atcgaagtaggtcgtgcggatggtgtagaagtgcgtcatatcgtaggcgctatcgccaat
gaaggtgatattaacagccgttacattggccatatcaaactttatgatgactactctacc
gttgaattaccacaaggcatgccaaaagaattgcttcaacaattcggtaaaactcgcgtt
ttaaataaacaaatgcaaatgagctttatgggtgcggtacaatcagacagcggacgtagt
ggtaacgattttggtggaaaaggccgtcgcgatggtcgccgtaatgaccgtggagagcga
ggacaagatcgcttccgtggtgaacgtaatggtgagcgtcgtcagcgtaaatttaacgat
aaaaacgaccgcacttttaatgaacgtggtcgccgagatcgtcaacgttaa
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