Haemophilus parainfluenzae: PARA_13360
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Entry
PARA_13360 CDS
T01605
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
hpr
Haemophilus parainfluenzae
Brite
KEGG Orthology (KO) [BR:
hpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpr03019
]
PARA_13360
Enzymes [BR:
hpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PARA_13360
Messenger RNA biogenesis [BR:
hpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PARA_13360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
T2SSE
nSTAND3
AAA_30
ResIII
NACHT
AAA_25
TsaE
Fis1_TPR_N
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CBW15438
UniProt:
A0AB33QL54
LinkDB
All DBs
Position
1324167..1328009
Genome browser
AA seq
1280 aa
AA seq
DB search
MLVDQRRLSARIHGIGKIKSQEAQQAVAAEIQQQIEQVQLRVENRKSAVKNPIVFPESLP
VSQRKAEIQKLLSEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIAARSV
AARIAEELETELGGLVGYKVRFNDQISDDTQIKLMTDGILLAEIQNDRFLNQYSCLIIDE
AHERSLNNDFILGYLKQLLPRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRTYPVEV
RYRPVVEEDDQDQLQGILNAVDELQAEGRGDILIFMNGEREIRDTAEALQKQNLKHTEIL
PLFARLSAQEQNKIFHPSGLNRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ
RLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFNSRPEFTDPEILRTNLASVILQMT
ALGLDDIEAFPFVDAPDKRHIQDGIKLLEELGAFEMVRTKAGEKRQLTAVGRQLAQLPVD
PRLAKMLLTAVSQGALHEVMIIVAALSIQDPRERPQEKQQASDEKHRRFADKKSDFLAFL
NLWRYLQEQQKELSKNQFRRQCQKDFLNYLRIREWQDIYHQIRLTVREMGLPINSEKAEY
QQIHTALLSGLLSHIGLKESEKQQYLGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKL
WGRMVAEIEPEWIEPLAEHLIKKSYSEPHWSKSRGAVIADEKVTLYGVPIVAARPVNYGA
IDPTVSREIFIQSALVEGDWNTKHKFFKENQRLVREVEELEHKSRRRDILVDDRTLFEFY
DQRIGTEVVSQKHFDTWWKKAQQKDPELLNFERSFLINDDAEQVSKLDFPNFWHQGNLKL
KLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDWQIPGLREELVIALIKSLPKSYRRNFV
PAPNYAQAFLSRAVPLEKPLLDTLIYELRRMTGVTVEAEHWNWEQIPSHLKMTFRVVDEN
GKKIAESMNLDELKFNLKDRVQESISAVADDGIEQSGLHIWSFADLPQCYEQKQRGFSVK
AFPAIVDEKDAVGIKLFETEFEQAVAMQQGLRRLLLLNVPSPIKYLHEKLPNKAKLGLYF
TPFGRVLDLIDDCIACAVDKLIADFGGFVWDEAGFEKLRDFVRENLNEVTVDIAQKVEQI
LSLNHALNQRLKGKMDFTMAFAFSDIKAQLSGLIYPGFVQKSGYDRLPDLQRYLQAVDKR
IDKLAQDVNRDRAAMLRVEQVQQAYQQLLAKLPKSKPISDEVAEIRYMIEELRVSLFAQQ
LGTKYQVSEKRVLGVIQNIE
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggatcaacgtcgtttatccgctcgtattcatggtattggaaaaattaaaagc
caagaagctcaacaagctgtggctgctgaaattcagcaacagattgaacaggttcaatta
cgtgtagaaaatcgtaaaagtgcggttaaaaatccgattgtttttccagagagtttgccc
gttagccaacgcaaagcagaaattcaaaaactgctttctgaacatcaggtcattgtggtg
gcaggggaaaccggttcaggtaaaaccacccaattgccaaaaatgtgtttggaattaggt
ttcggcaatttgggcatgattggtcatactcagcctcgccgtattgccgctcgttcagtg
gcagcgcgtattgcagaagagctggaaacagagcttggtggtttagttggttataaggtt
cgttttaatgatcaaatcagtgatgatacacaaatcaaattgatgaccgatgggatctta
ttagcagaaattcaaaacgatcgttttctcaatcaatattcttgtttgattatcgacgaa
gctcacgaacgcagtctgaacaatgattttattcttggttatctgaaacagcttttacca
cgtcgtcgtgatttaaaacttatcatcacttctgcgaccattgatgtggaacgcttttcc
aaacatttcaacaatgccccgattattgaagtctcaggcagaacctatcctgttgaagta
cgttatcgtcccgtagtagaggaagacgatcaagatcagctacaaggcattcttaatgcg
gtggatgaactgcaggcggaaggtcgtggcgatattttgatctttatgaatggtgagcga
gaaattcgcgatactgccgaagccttacaaaaacaaaatctaaaacatacggaaattcta
ccgctctttgcacgcctttctgcgcaagagcaaaataaaattttccacccaagcggatta
aatcgcattgtattagcgactaacgtcgcggaaacctcattgaccgtgccgggcattaaa
tatgtgattgacccaggtacagcacgcatttcccgttatagctatcgcaccaaagtgcaa
cgtttaccgattgaacctatttcacaggcatctgctaatcagcgtaaaggtcgttgtggt
cgtgtaagtgaagggatttgtattcgtttatattcggaagaggattttaattctcgtccg
gagtttaccgatcctgaaatcctgcgcaccaatttagcctccgttattttgcaaatgacg
gcattgggcttagatgatattgaagctttcccgtttgttgatgcgccagataaacgccat
attcaagatggtataaaactgttggaagaattgggtgcgtttgaaatggttcgcactaaa
gcgggcgagaaacgtcaattaacggcagtaggccgtcaattagctcaactccctgtggat
cctcgtttagcgaagatgttgctgactgctgtctcacaaggtgcgttgcatgaagtgatg
attattgtcgccgcgttatccattcaagatcctcgcgagcgcccacaagaaaaacaacaa
gcttccgatgaaaaacatcgtcgttttgccgataaaaaatcggatttcttggcgttctta
aatctttggcgttatctacaagaacaacaaaaagaattgagtaaaaaccaattccgtcgt
caatgccaaaaggatttcttaaattatttacgtattcgtgaatggcaggatatttatcat
caaattcgtttaaccgtgcgtgaaatgggcttgccgattaattctgaaaaagcagaatat
cagcaaattcataccgcacttttaagcggcttgctttctcatattggtctaaaagaatcg
gaaaaacaacaatatcttggcgcgcgtaatgcccattttgcaattttccccaattctgtg
cttttcaaaaaacaaccgaaatgggtgatggcggcagagttagtggaaacctccaagcta
tgggggcgtatggtggcggaaattgagccagaatggattgagccacttgccgagcattta
attaaaaaatcctattcagaaccgcattggtcgaaatcccgtggggcggtaattgccgat
gaaaaagtcacgctttacggtgtgccgattgtggctgcgcgaccggtgaattacggtgct
attgatccgacggtaagccgcgagatctttattcaatcagccttagtggaaggggattgg
aataccaaacataaattcttcaaagaaaatcaacgactcgttcgagaagtagaggagttg
gaacacaaaagccgccgccgtgatattttggtggatgaccgcacgctttttgaattttac
gatcagcgtattggcacagaagtagtttcccaaaaacattttgatacctggtggaaaaag
gcgcagcaaaaagatcctgaattgcttaattttgaacgttcattcttgattaatgatgat
gcggaacaagtgagcaagctggatttcccgaatttctggcatcaaggtaatttgaaactc
aaactgacgtatcaatttgaaccaggtaccgatgcggacggggtgaccgtgcatattccg
ttgccattgctcaaccaagtggaaatgaccggctttgattggcaaattccaggcttgcgt
gaagagctggtgatcgcgctgattaaatcgctgccgaaatcttatcgtcgtaattttgtg
ccggcacctaattatgctcaagcttttttaagtcgagcagtgccgctggagaaaccatta
ttagatacgctaatttatgaattacgtcgtatgacgggcgtcaccgtagaagcagaacat
tggaattgggaacaaatcccaagccatttgaaaatgacgttccgtgtggtggatgaaaac
ggcaagaaaatcgcggaatccatgaatttggatgagctgaaattcaacttaaaagatcgt
gtgcaggaaagtatttctgctgtagcagatgatggcattgagcaaagcggattgcatatt
tggagttttgcagatttaccacaatgttacgaacaaaaacagcgtggttttagcgtcaaa
gcgttcccggctattgtagatgaaaaagatgccgtaggtatcaaactgtttgaaacagag
tttgagcaagcagtggcaatgcaacaaggtttgcgtcgattgttgctactcaatgtgcca
tcaccaattaagtatctgcatgaaaaattgccgaataaagctaaattggggctgtatttt
actccgttcggtcgagtgttggatttgatcgatgactgtatcgcttgtgcggtggataaa
cttattgccgattttggcggttttgtatgggatgaggcaggctttgaaaaattgcgtgat
ttcgtgcgggaaaatctgaatgaagtgaccgtagatattgcacaaaaagtggagcaaatt
ctctcccttaaccatgccttaaaccaacgtttaaaaggcaaaatggatttcactatggcc
tttgccttttccgatattaaggcgcagttaagcggactgatttatccaggttttgtgcaa
aagagcggttatgatcgcctaccggatttacagcgttatctgcaagccgttgataaacgt
attgataagttggctcaagatgtaaatcgagatcgtgctgcgatgctacgcgtggagcag
gttcaacaggcttatcaacaattgctcgctaaactgccaaaatccaaacctatttctgat
gaagtggcggaaattcgctatatgattgaagaattaagggtgagtttatttgcacagcaa
ctagggacgaaatatcaggtatcggagaagcgggttttaggggttattcaaaatatagag
taa
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