Haemophilus parainfluenzae: PARA_14900
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Entry
PARA_14900 CDS
T01605
Name
(GenBank) ssDNA exonuclease, 5'--> 3'-specific
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hpr
Haemophilus parainfluenzae
Pathway
hpr03410
Base excision repair
hpr03430
Mismatch repair
hpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PARA_14900
03430 Mismatch repair
PARA_14900
03440 Homologous recombination
PARA_14900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpr03400
]
PARA_14900
DNA repair and recombination proteins [BR:
hpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PARA_14900
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PARA_14900
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PARA_14900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CBW15590
UniProt:
A0AB33QMQ4
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All DBs
Position
1498706..1500430
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AA seq
574 aa
AA seq
DB search
MKKLIKRREIPAGNSVSDNALLDRLYRSRHIKNSQELDRTLQSMLNPNQLHGIQQAVDLL
VNAYQQQQKIVIVGDFDADGATSTALSVLALRMLGFTDVEYLVPNRFEQGYGLSVPVAEM
AMEKDVQLLMTVDNGVSSFEGVAYLKEQGVKVLITDHHLPPEILPNADAIVNPNLQQCGF
PSKCLAGVGVAFYLMLALRAKFRELGIFTAETQPNFTELLDLVALGTIADVVPLDQNNRI
LAHQGLMRIRAKRCRPGIIALAEVANREVEKLCSADLGFAIAPRLNAAGRLDNMSVGVEL
LLAESMQEARAQALDLDSLNQARKEIEQGMKLEALEICRNLTALSDELPMGIALFQPDWH
QGVLGIVASRIKDQYHRPVIAFAQDQEGILKGSARSIEGLHMRDVLERIHSQHPDMILKF
GGHAMAAGLSIKESFFPDFQKIFNQTVQDWLNEDQLQGVIWTDGELQANEFSIETAEVIK
SGGPWGQAFPEPVFDGEFKIFEQRAIGQNQNHLKMLVEPKNGGPLLDAIAFNIDTRYYPD
LSIKQAKFAYKLEINEFRGNRNLQLLVDYIEPIG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaactcatcaaacgtcgtgaaattcctgccggaaattctgtttcagataatgca
ttactcgatcgtctctatcgttctcgccatattaaaaacagccaagaattagaccgcact
ttgcaatcaatgctgaatcccaatcaattacacggcattcaacaagccgtagatttattg
gttaatgcttatcaacagcaacaaaagattgttattgtcggtgattttgatgcagacggg
gcaaccagtacggcactttcagtattagctttgcgtatgcttggctttactgatgtggaa
taccttgtaccgaatcgttttgagcaaggctatggtttgagtgtacccgttgctgaaatg
gcaatggaaaaagacgtgcagttattaatgacggtggataacggggtatcgtcttttgag
ggagtggcatatttaaaagagcagggtgtgaaggtgttgattaccgatcatcacttgcca
ccagaaatactgccgaatgctgatgccattgttaatccaaatttgcaacaatgtggtttc
ccttcaaaatgtttagccggtgtaggcgtagcgttttatttaatgctcgctttgcgtgcc
aaatttcgcgagttgggcatttttacggcagaaacacaacctaattttactgaattactg
gatttagttgcgctcggcacgattgcagacgttgttccccttgatcaaaataaccgtatt
ttagcccatcaagggttgatgagaattcgtgcgaaacgttgtcgaccaggaattattgct
ctcgctgaagtggctaatcgagaagtcgaaaaactttgctcggctgatttgggctttgcg
attgcaccacgtttaaatgctgcgggccgattagataatatgtctgttggtgtagagtta
ttacttgcagaaagtatgcaagaggcaagagcacaagccttggatttggacagcttgaat
caggctagaaaagaaattgagcaaggcatgaagttagaagccttagaaatttgccgaaat
ctcaccgcactttctgatgaattaccgatggggatagctttattccagccagattggcat
caaggtgtattaggtattgtggcttctcgaatcaaagatcaataccatcgaccagtcatt
gcttttgcacaagatcaagaaggcattttaaaaggttctgctcgttcaattgaaggcttg
catatgcgcgatgtattagagcgtattcattcccaacatccggatatgattttaaaattt
ggcggtcatgccatggcagcaggattaagcattaaagaaagctttttccctgattttcaa
aagatttttaatcaaacggtgcaagattggttaaatgaagatcaattacaaggtgtgatt
tggacggatggcgaacttcaagcaaatgaatttagtattgaaacagcagaagtgataaaa
tctggcgggccttggggacaagcttttcctgagcctgtttttgatggcgaatttaaaatt
tttgagcaacgtgcaatcggacaaaatcaaaatcatttaaaaatgcttgttgagcctaaa
aatggtggtccattattagatgccattgcgtttaatatcgatactcggtattatcccgat
ttgtcgattaagcaggcaaaatttgcttataagttagaaattaatgagtttcgtggaaat
cgaaacctccaattattagtcgattatattgaaccaattggttaa
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