Haemophilus parainfluenzae: PARA_18900
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Entry
PARA_18900 CDS
T01605
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hpr
Haemophilus parainfluenzae
Brite
KEGG Orthology (KO) [BR:
hpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpr03016
]
PARA_18900
Enzymes [BR:
hpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PARA_18900
Transfer RNA biogenesis [BR:
hpr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PARA_18900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
DUF2274
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
CBW15990
UniProt:
A0AB33QM61
LinkDB
All DBs
Position
1953404..1955383
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AA seq
659 aa
AA seq
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MFQDNPLLAQLKQQIHDSKEHVEGVVKSTDKAYGFLECDKKSYFIAPPAMKKVMHGDKIK
ATIEKQGDKEQAEPEELIEPMLTRFIAKVRFNKDKKLQVLVDHPNINQPIGAQQAKSVKE
ELQEGDWVVANLKTHPLRDDRFFYATINQFICRADDELAPWWVTLARHEQSRHPVQGAES
YEMLDQQTREDLTALHFVTIDSESTQDMDDALYIEPIEQDGTQTGWRLVVAIADPTAYIA
LDSQIEKDAKQRCFTNYLPGFNIPMLPRELSDELCSLMENETRPALVCYIETDLAGNITA
KPRFVSAYVQSKAKLAYNKISDYLEQVPDAWQPETPEIAQQIDWLHQFTQARIQWRKTHS
LLFKEKPDYSFILAENGKVKEIKAEYRRIANQIVEESMIIANICAAQFLAEHAQTGIFNT
HTGFDKKFLENAHNFLMANLANEENQAELAERYSVENLATLKGYCQMRHDIEPIEGDYLE
FRLRRYLTFAEFKSELAPHFGLGLEGYATWTSPIRKYSDMVNHRLIKAVLTQQACEKPQD
EVLARLQEARRQNRLVERDIADWLYCRYLADKVAENVEFDAEVQDVMRGGLRVQLLENGA
SMFVPASTLHPNKDEMQVNADELALYIQGERRYKIGDLVKVKLTEVREETRSIVGQLII
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagataatccactactcgcacaacttaagcaacaaatccacgatagcaaagaa
cacgttgaaggcgtggtaaaaagtactgataaagcttatggttttttagagtgcgataaa
aaaagctactttattgcccctcctgcaatgaaaaaagtgatgcatggtgacaaaatcaaa
gccaccattgaaaagcaaggcgataaagagcaagctgaacctgaagaattaattgaacca
atgctcacgcgctttattgccaaagtgcggttcaataaagacaagaaattgcaagtttta
gttgatcatccaaatatcaaccaaccaattggtgcacaacaagctaaatctgtaaaagaa
gaattacaagagggtgattgggttgtagcaaatttaaaaacccacccattacgcgatgat
cgctttttctatgccaccatcaatcaatttatctgccgtgctgacgatgaattagccccc
tggtgggtcacgctggcacgccatgaacaatctcgtcatcctgtgcaaggtgcagaaagc
tatgagatgttagatcaacaaacacgtgaagatctgaccgcacttcattttgttactatt
gactctgaaagcacacaggatatggacgatgctctttacatcgaacctatcgagcaagat
ggtacgcaaaccggctggcgattagtcgttgccattgcggatcccacagcttacattgca
ttagattcacaaattgaaaaagatgcaaaacagcgttgtttcaccaattatttgccaggc
ttcaacatcccaatgttgccacgtgaattatctgatgaattatgctcattaatggaaaat
gaaactcgccctgcattagtatgttacattgaaacggatcttgcaggtaacatcacggct
aaaccgcgttttgtgtccgcttatgtgcaatctaaagcaaaattagcctataacaaaatt
tcagattatttagaacaagtaccggatgcatggcaaccggaaacacctgaaattgcccag
caaattgattggttacatcaatttactcaagcgcgtattcaatggcgtaaaacccattca
ttgttatttaaagagaaaccggattattcctttattctcgctgaaaatggcaaagtaaaa
gaaattaaggcggaatatcgtcgtattgcaaatcaaatcgtggaagaatccatgattatt
gccaacatttgtgccgctcaattcttagcggagcatgcacaaacaggtatctttaataca
cacacgggatttgataagaaattcttagaaaatgcgcataatttcttaatggcaaattta
gccaatgaagaaaatcaagctgaacttgctgaacgttattcggtggaaaatttggcaacc
ttaaaaggttattgccaaatgcgtcatgatattgaaccgattgaaggtgactatttagaa
ttccgtttacgtcgttatttaacctttgcggagtttaaatccgaacttgctccacatttt
gggcttggattagaaggttatgcgacctggacatcgcctatccgtaaatattccgatatg
gtgaaccatcgtttaattaaagccgtgctcacacagcaagcttgtgaaaaaccacaagat
gaagtccttgctcgcttacaagaagcccgtcgtcaaaatcgcttggttgagcgtgatatt
gccgattggctatattgtcgctaccttgctgataaagtagctgaaaatgtggaatttgat
gcagaagtacaagatgtgatgcgtggtggtttacgtgttcaattattagaaaatggcgca
tctatgttcgtaccagcttctacattgcatccaaataaagatgaaatgcaagtgaatgct
gatgaattagcgctgtatattcaaggggagcgccgttacaaaatcggtgatttagtgaaa
gtaaaactcaccgaagttcgagaagaaactcgtagtattgtcggtcaattaatcatttaa
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