| Entry |
|
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| Name |
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
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| KO |
| K03090 | RNA polymerase sigma-B factor |
|
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| Organism |
hprf Helicovermis profundi
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| Brite |
KEGG Orthology (KO) [BR:hprf00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:hprf03021]
HLPR_00090
Transcription machinery [BR:hprf03021]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HLPR_00090
|
|---|
| SSDB |
|
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| Motif |
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| Other DBs |
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| LinkDB |
|
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| Position |
9800..10612
|
|---|
| AA seq |
270 aa
MDSVTTSNINIDIKSIDMSNLKSIDAKLLFRIYKDSKSIDIRNELIKRYIYIAEILSKKY
INKGIDYEDLFQVASLGLIYAIERFDVDRGFEFSSFATPTIIGEIKKYFRDKGWSVRVPR
RIQELSKKIIFAKSKLQQELQKIPKIKDIAEYLNCTEEQVLEAMEASQVYTPKSLDISYD
SKGDDKDIQLLDIVGKEDKYFDVFENKDFIDKCFMKLNEVEKKIIYGRFFENKTQIQIAN
ELNVSQMTISRMEKKVIKKFRKEYLKISEI |
|---|
| NT seq |
813 nt +upstreamnt +downstreamnt
atggatagtgtaacaacctcaaatattaatatcgatattaaatcaatagatatgagtaat
ttaaaaagtatagatgcaaaattactttttagaatttataaagattctaaaagcattgat
attcgaaatgaattaataaagagatatatttatatagcagaaattctttctaaaaaatat
ataaataaaggtatagactatgaagatctttttcaagtcgcgtctttaggtttgatttat
gcaatagaaagatttgatgtagatagaggttttgaattttcaagttttgcaacacctaca
ataattggtgaaataaaaaagtattttagagataaaggttggtcagtaagagtaccaaga
agaattcaagaactatctaaaaaaataattttcgctaaaagtaaattacaacaagaactt
caaaaaattcctaaaattaaagatattgcagaatatttaaattgtaccgaagagcaagtt
ctagaagctatggaagcttcacaagtctatacgccaaagtcattagatataagttatgac
agtaaaggtgatgataaagatattcaattacttgacattgttggtaaagaagataaatat
tttgatgtatttgaaaataaagattttattgataaatgttttatgaaattaaatgaagta
gagaaaaaaattatctatggtagattttttgaaaataaaactcaaatacaaatagcaaat
gaattaaatgtgtcacaaatgacgatttctagaatggagaaaaaagtaataaaaaaattt
agaaaagagtatttgaaaattagtgaaatataa |
|---|
