Helicovermis profundi: HLPR_06110
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Entry
HLPR_06110 CDS
T09891
Symbol
rpsA_1
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hprf
Helicovermis profundi
Pathway
hprf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HLPR_06110 (rpsA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hprf03011
]
HLPR_06110 (rpsA_1)
Ribosome [BR:
hprf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HLPR_06110 (rpsA_1)
Bacteria
HLPR_06110 (rpsA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
S1_2
OB_RRP5_4th
DUF2187
Motif
Other DBs
NCBI-ProteinID:
BEP28280
UniProt:
A0AAU9ET98
LinkDB
All DBs
Position
712511..713788
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AA seq
425 aa
AA seq
DB search
MSDNIKEKNEAVNINEEINMDQSEVEENKTEEVIEEVIEESMDDFMEQIDKSMNRIYPED
ILKGRVISVNDEEVIVNIGYIMDGIITREEFSEDGILNPRDIVNVGDEINAFVVKVDDGE
GNIVLSRKRAERIVVWDDLQKFYDKEEDITVGIDELVKGGALAHFKGVRIFIPASHVSAS
YTEDLTEYIGVEMKIRLIEFDKDSKKVVGSRKVVEKEELDVLKNNLWSVIKIGEKRNGVV
RRLEKYGAFVDIGGTDGLLHISEMSFKRILHPSEVMSEGDKIEVIVQDFDKEKGRISLKL
AVQYENPWDDIYSRFNVGDIVEGNVVRLKPFGAFIDIGEGIEGLLHISEISEERVNKVSD
VLKINQKVEVAILDIKQDEKRISLSIKEALNNDSSYDFDDYEEDDKGIEPTLGDLFKDKF
DKLKF
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataatattaaagaaaaaaatgaagcagtaaatattaacgaagaaattaatatg
gatcaaagtgaagttgaagaaaacaaaactgaagaagtaattgaagaagtaattgaagaa
tcgatggatgattttatggagcaaattgataaatcaatgaatagaatttatccagaagat
attttaaaaggaagagttatttctgtaaatgatgaagaagtaattgtgaatattggttat
attatggatggaataataactagagaagaattttcagaagatggaatattaaatcctaga
gacatagtaaatgttggcgatgaaatcaatgcttttgttgtaaaagttgatgatggagaa
ggcaatattgtactctcaagaaaaagagctgaaagaatagtcgtttgggatgatcttcag
aaattctatgataaggaagaagatataactgttggtattgatgaacttgtaaaaggtggt
gctcttgcgcattttaaaggagtaaggatatttatacctgcttcacatgtttcagcttca
tatactgaagatttaactgaatatataggcgttgagatgaaaataagactaatagaattt
gataaagatagtaaaaaagtagttggttcaagaaaagttgtagaaaaagaagagcttgac
gttttaaaaaataacctttggtcagttattaaaattggagaaaagagaaatggagttgta
aggcgccttgaaaaatatggtgcatttgttgatattggtggaactgatggattacttcat
atttctgagatgtcttttaaaaggattttacacccttcagaagttatgagtgaaggcgac
aaaattgaagttatagttcaagattttgataaagaaaaaggacggatttctcttaaactt
gcagtccaatatgaaaatccatgggatgatatttattcaagatttaatgttggtgatatt
gttgaaggaaatgttgtaagactaaaaccttttggtgcatttattgatataggagaagga
attgaaggtctacttcatatttcagaaatatctgaagaaagggttaacaaagtttctgat
gtattaaaaattaatcaaaaagttgaagtggcaattttagatataaagcaagacgaaaaa
agaattagtttaagtataaaagaagcactaaataatgattcatcatatgacttcgatgac
tatgaagaagatgacaaaggaatagaaccaacgcttggtgatttattcaaagataaattt
gataagttgaaattttag
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