Helicovermis profundi: HLPR_10240
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Entry
HLPR_10240 CDS
T09891
Symbol
gyrB_2
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hprf
Helicovermis profundi
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hprf03032
]
HLPR_10240 (gyrB_2)
03400 DNA repair and recombination proteins [BR:
hprf03400
]
HLPR_10240 (gyrB_2)
Enzymes [BR:
hprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HLPR_10240 (gyrB_2)
DNA replication proteins [BR:
hprf03032
]
Prokaryotic type
DNA Topoisomerases
HLPR_10240 (gyrB_2)
DNA repair and recombination proteins [BR:
hprf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HLPR_10240 (gyrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BEP28693
UniProt:
A0AAU9E5S1
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All DBs
Position
1198541..1200514
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AA seq
657 aa
AA seq
DB search
MKKVNETYGNESISSLKGADRVRKRPSVIFGSDGLDGSKHSFFEILSNSIDEAREGYGKE
ITIIKHKDFSITIIDNGRGVPVDYNNSEKKYNWELVFCELYAGGKYKNNDGENYEYSLGL
NGLGTCATQYSSEYMDVEVFRDGYKYSLHFEKGENIGGLIKEKFDYKKTGTIHKWKPDLD
VFTDIDIPIEHFMDVLKRQSIVNSGLKFVLIDENTEITHEYIYENGIKDYLEEINNEKNF
TDVLFFSKEGRGKDREDKSEYKVKVEIAFSFNNEVNLLEYYHNSSYLEYGGSPDKAVKQA
FIYEIDKYIKRENKYTKNEKKISFIDIQDSLVLVTNSFSTVTSYENQTKKAITNKFIQEF
MSSFIKSKLEIFFIENKDVADKIINQVLINKRSREKAEKTRLNLKKTLGGKLDVTNRVKK
FVDCRTKETEKREIYVVEGDSALGACKLARDSEFQAIMPVRGKILNCLKADYDKIFKSEI
IIDLLKVLGCGVEIKTKHNKDLETFNLDNLRWDKVIICTDADVDGFQIRTLILTMFQRLT
PSLINNNKIFIAETPLFEITSGKKTHFAYSEKEKQDILSKLKGKYTIQRSKGLGENEPDM
MWETTMCPTSRRLIEVEPENEEDTMNMFNILLGDNLSGRKEFIADNGEKYIEQIDIS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaagtcaatgaaacttatggaaatgaaagtatttcttcattaaagggtgctgat
agggttaggaaaagaccatctgttatttttggttctgacggacttgatggatcaaagcat
tcatttttcgaaatattatcaaattctattgatgaagctcgtgaaggatatggaaaagaa
attacaataatcaaacataaggatttttctattacgataattgataatggtagaggagtt
cctgttgattacaataacagtgaaaaaaaatataactgggaacttgtgttttgcgaatta
tatgcgggtggaaaatataagaataatgatggtgaaaactatgaatattcacttggatta
aatgggcttggaacatgtgctactcaatatagctctgaatatatggacgttgaagttttt
agagatggatataaatattcattgcatttcgaaaaaggtgaaaatattggtggtttaata
aaagagaaatttgattataaaaaaacaggtactatacataaatggaaacctgatcttgat
gtatttactgatattgatattccaattgagcattttatggatgttctaaaaaggcagtca
attgtaaatagtggtttgaaatttgttttgattgatgaaaatactgaaattacgcatgaa
tatatttatgaaaatggaataaaagattatttagaagaaattaataatgagaagaatttt
actgatgttttgttcttttcaaaagaaggaagaggaaaagatagagaagataaatctgaa
tataaagtaaaggttgagattgcgttttcttttaataacgaagttaaccttttagaatat
tatcataattcaagttatcttgaatatggtggttctccggataaagcagttaaacaagct
tttatttatgaaattgataaatatataaagagggaaaataaatatactaaaaatgaaaag
aaaattagttttattgatatacaagatagtttagtgcttgtaacaaattctttttcaact
gtaacaagttatgaaaatcaaacaaaaaaagcgatcacaaataaatttatacaagaattt
atgtcttcattcattaaatcaaaattagaaatattttttatagagaataaagatgttgca
gataaaattattaatcaagtattaattaataaaagaagtagggaaaaggctgaaaaaaca
agacttaatctaaagaaaacacttggcggaaaacttgatgttacaaatagagttaagaaa
tttgttgattgcagaacaaaagaaactgagaaaagagaaatttatgtcgtggaaggtgat
tctgctttaggtgcatgtaaacttgcaagagactctgagtttcaagctattatgcccgta
agaggtaaaattttaaattgtttgaaagctgattatgataaaatttttaaaagtgaaata
attatagatttattgaaagttttaggatgtggagttgaaattaaaactaaacataataaa
gacttagaaacattcaatttagataatcttaggtgggataaagttattatatgtacggat
gcagatgttgatggttttcaaattagaacgctaattttaactatgtttcaaagattaaca
ccttcgcttattaataacaataaaatatttattgcagaaacacctctttttgaaataaca
tcaggtaaaaaaacacattttgcttatagtgaaaaagaaaaacaggatatattatcaaaa
ttaaaggggaaatacacaattcaacgttcgaaaggacttggtgaaaatgagccggatatg
atgtgggagacaacaatgtgcccaacgagtagaagactaattgaagtagaacctgaaaat
gaagaagatactatgaatatgtttaatatactcttaggtgacaatttaagcggaagaaaa
gaatttattgctgataatggtgaaaaatatatagagcagattgatataagttag
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