Helicovermis profundi: HLPR_13840
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Entry
HLPR_13840 CDS
T09891
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hprf
Helicovermis profundi
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hprf03009
]
HLPR_13840
Enzymes [BR:
hprf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HLPR_13840
Ribosome biogenesis [BR:
hprf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HLPR_13840
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BEP29053
UniProt:
A0AAU9E6M7
LinkDB
All DBs
Position
complement(1597534..1598253)
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AA seq
239 aa
AA seq
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MEKIRLQKYMAMCGVASRRKSEEFITKGYVTVNGVVVKELGFKVDMTLDKVTYKNKIIKL
EENKVYIIINKPKGYVTSLNDQFNRPIVTDLLKNKISERIYPIGRLDYHTTGLLILTNDG
ELTNKITHPKNHVTKTYEVLVRGKISKFELNNLRTGVNIGGYVTKPAVIEITNTTAKTTT
IKITISEGKNRQVRKMIESVGHSVIELNRASIGEMKIGQLKIGEFRYLTKQEVKYLKSL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaataagacttcaaaaatacatggcaatgtgcggcgttgcatcaagaagaaaa
tctgaagagtttattactaaaggctatgtaacagtaaatggcgtagtagtaaaagaatta
ggctttaaagttgatatgactttagataaagttacttataaaaataaaataataaaatta
gaagaaaataaagtttacattattattaataaaccaaaaggatatgttacttcacttaat
gatcaatttaatagaccgattgtaactgatctactaaaaaacaaaataagtgagagaatt
tatcccattggaagacttgattatcatacaacaggattattaattttaacaaatgatggt
gaactgacgaataagattactcaccctaaaaaccatgttacaaaaacgtatgaagtttta
gtaagaggaaaaatttcaaaatttgaactaaataatcttagaactggtgtaaatattggt
ggttatgttacaaaacccgctgtaattgaaattacaaatactacagcaaaaactacaacg
attaaaataacgatttctgagggcaaaaatagacaggttagaaagatgatagaatctgtt
ggccattcggttattgaattaaatagagctagtattggtgagatgaaaattggtcaactt
aaaattggagaatttagatatttgacaaaacaagaagttaaatacttaaaatcattatag
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