Helicovermis profundi: HLPR_15050
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Entry
HLPR_15050 CDS
T09891
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hprf
Helicovermis profundi
Pathway
hprf03030
DNA replication
hprf03410
Base excision repair
hprf03420
Nucleotide excision repair
hprf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLPR_15050 (polA)
03410 Base excision repair
HLPR_15050 (polA)
03420 Nucleotide excision repair
HLPR_15050 (polA)
03440 Homologous recombination
HLPR_15050 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hprf03032
]
HLPR_15050 (polA)
03400 DNA repair and recombination proteins [BR:
hprf03400
]
HLPR_15050 (polA)
Enzymes [BR:
hprf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HLPR_15050 (polA)
DNA replication proteins [BR:
hprf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HLPR_15050 (polA)
DNA repair and recombination proteins [BR:
hprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HLPR_15050 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HLPR_15050 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
BEP29174
UniProt:
A0AAU9EM61
LinkDB
All DBs
Position
complement(1731851..1734544)
Genome browser
AA seq
897 aa
AA seq
DB search
MKDKVIIIDGNSLINRAFFAIPSLSNKEGIPTNGMYGFLNMLFKLLDKHSPKYVSVAFDL
KAPTFRHKLSSDYKGTRKGMPDDLRPQMNMLKEILDNLGINRMELEGFEADDLIGSVAKL
CGRENLDVMIFTGDKDALQLVDDNITVYITKRGITNLKEYREEDVFEEFTLMPNQIIDYK
GLSGDTSDNIPGIPGVGPKTAIKLLLEFTTVENLILNSEKVKNKRIRGLVEEYKEQALLS
KKLATIVTNIPFEFNVDELLIKEKNIEKLIELYKKYEFTSFIRNLKEESLHLTNTTSEDE
INNNLVEEEEIEFKLINNLNELSNMVSEIKKNKVISIKSIYDKANIRTNEAIGFAISDKD
TTYYVDLLGEVKFIDLKVILEDENIKKITYNGKREFLIAFRYGISIENHTFDGFIANYLI
NPSRNKYELSDVAMEYLSKAIKSKEDLLGKGAKAKKYCDISFSDLSNYSAVYSRILFEVH
CELDKKLIELNLSELFIDVEIPLVEILASTEYEGFKVDESVLNEIDEDLTNKLREIESEI
YSYSNEKFNINSPKQLGVVLFETLELPVIKKTKTGFSTSHDVLIKLEKKHPIVPLVIEYR
TYSKLKSTYVDGIRSVINKETGKVHSSLNQTVAVTGRLSSSDPNMQNIPVRIPIGRKIRK
VFVADNNCKLIDADYSQIELRVLAHMSKDENLLLAYRENLDIHTMTASKVFNIPLDEITA
DIRSRAKEVNFGIVYGMSDYGLSETLKIPRKTAKLYIEQYFEKYPGVKEYMDTTIKECKE
IGYVVTLLNRRRYIPEINHKNFNLRSFAERTAMNTPIQGSAADIIKIAMINVYNRLKREK
LKSKLILQVHDELIIDTSEDEIEIVKEILVDEMENAYKLDIPLLVDMKVGTSWFDTK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaagttattattatagatggtaatagtttaataaatagagctttttttgcg
ataccttcattatctaataaagaaggcattccaactaatggtatgtatggatttttaaat
atgttatttaaacttctagataaacacagtcctaaatatgtaagtgttgcatttgattta
aaagctccaacatttaggcataaactttcaagtgattacaaaggaactagaaaaggtatg
cctgatgatttaagaccgcaaatgaacatgcttaaagaaatattagataatttaggcatt
aacagaatggaacttgaaggttttgaagctgatgacttaattggaagtgttgcaaaactt
tgtggtagagaaaatcttgatgtgatgatttttacaggtgacaaagatgcacttcagtta
gttgatgataatattactgtttacatcaccaaaagagggataacaaatcttaaagaatac
agagaagaagatgtttttgaagaatttactttgatgcctaatcagattatcgattataaa
ggcttaagtggtgatacttcggacaatattcctggaatacctggtgttggacctaaaaca
gctattaaattacttttagaatttacaacggttgaaaatttaatacttaattcagaaaag
gtaaaaaataagagaattagaggattagttgaagaatataaagaacaagcacttcttagt
aaaaaacttgctacaatagttacaaatataccatttgaatttaatgtagatgaattatta
ataaaagaaaaaaatattgaaaaattaattgaattatataaaaaatatgaatttacttct
tttattagaaacttgaaagaagagagcttacatttgacaaatactacatctgaagatgaa
ataaacaataatttagttgaagaagaagaaattgaatttaagttaataaataatcttaat
gaactttcaaatatggttagtgaaattaaaaaaaacaaagtaatttcaattaagtcaata
tatgacaaggctaatattagaactaatgaagctattggatttgcaatttctgataaagat
accacttactatgttgatttattgggtgaagttaaatttattgatttaaaagtaattctt
gaagacgaaaatattaaaaagataacttataatggaaaaagagagtttttaatagcattt
agatatggtataagcattgaaaatcatacgtttgatggatttattgcaaattacttgatt
aatccgagcagaaacaaatatgagctttcagatgttgctatggagtatttatcaaaggca
ataaagtctaaagaagatttgcttggaaaaggtgcaaaagcaaaaaaatactgtgatatt
agttttagtgacttatccaattatagtgctgtttattcaagaatactatttgaagtacat
tgtgaattagataaaaaactgattgaacttaatttaagtgaattatttattgatgtagaa
attccactagttgagatattggcttctactgaatatgagggctttaaagttgatgaaagt
gttttaaacgaaattgatgaagatttaaccaataaactgcgtgaaattgagtctgaaata
tactcttattctaacgaaaaatttaatattaattcacctaaacaattaggcgtggtttta
tttgaaacacttgaacttccagtaattaaaaagacgaaaacaggattttctacaagtcat
gatgtcttaataaaactcgaaaaaaaacatcctattgtaccacttgtaatagagtataga
acttattcaaaattaaaatctacatatgttgatggaataagaagtgtaataaataaagag
actggaaaagttcattcaagtttaaatcaaactgttgcagttacaggaagacttagttca
agtgatcctaatatgcaaaatattcctgtaaggattcctatcggaagaaaaattagaaaa
gtgtttgttgcagataataattgtaaattaatagatgctgattactcacaaattgaacta
agagtactagcgcatatgtcaaaagatgaaaacctattacttgcctatagagaaaattta
gatattcatactatgactgcttcaaaagtttttaatattcccttagatgaaattacagca
gatattagaagtagagcgaaagaagtgaattttggtattgtatatggtatgagtgactat
ggtttaagtgaaacacttaaaataccaagaaaaaccgcaaagctatatatagaacaatac
tttgaaaaatatcctggtgtaaaagaatatatggatacaacaatcaaagaatgtaaggaa
attggatacgtagtaactttactaaatagaagaagatatattcctgaaataaatcacaaa
aactttaatttaaggtcatttgctgaaaggactgcaatgaatactccaattcagggaagt
gcggctgatataattaaaattgcaatgattaatgtatataatagattaaaaagagaaaaa
ttaaaatccaaacttatacttcaagttcacgatgaacttattattgacacaagtgaagat
gaaatagaaattgtaaaagaaattttagtagatgagatggaaaatgcatataaacttgat
attccgcttttggtagatatgaaagtggggactagctggtttgatacaaagtag
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