Helicovermis profundi: HLPR_15900
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Entry
HLPR_15900 CDS
T09891
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hprf
Helicovermis profundi
Pathway
hprf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLPR_15900 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hprf03019
]
HLPR_15900 (recQ)
03400 DNA repair and recombination proteins [BR:
hprf03400
]
HLPR_15900 (recQ)
Enzymes [BR:
hprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HLPR_15900 (recQ)
Messenger RNA biogenesis [BR:
hprf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HLPR_15900 (recQ)
DNA repair and recombination proteins [BR:
hprf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HLPR_15900 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
BEP29259
UniProt:
A0AAU9E3U3
LinkDB
All DBs
Position
complement(1816442..1818265)
Genome browser
AA seq
607 aa
AA seq
DB search
MNRYKLLKKYFGYDDFREGQIDIIDNVLNEKDSLVVMPTGGGKSLCYQLPSLLKSGITIV
ISPLIALMKDQVDGLNEIGINSTFLNSTLTSIETNNRISGIIDGAYKLVYVAPERLLSED
FIRLNEKINIDIVAVDEAHCISQWGHDFRPSYRNIPLFISRLKKRPTIVALTATATKLVI
EEIKNNLKLQNPFELTTGFDRKNLFYKVVKPNDRYKYVKEYLTKEFKEGSAIIYCSTRKT
VESLSKKLFESGFSVSAYHAGIDTEKRNRIQDAFMLDEIKIIVATNAFGMGIDKPDVRAV
IHYNMPKNMEAYYQEAGRAGRDGKKSDCILMYSPSDIVKQRLMIAQNANDLSREQISLKN
LQYLVSYCHTNDCLRNEITRYFGEESVTNNCENCGNCLCDSEFVDMTLESQKILSCIYRT
NQRFGVNVIIQVLRGSKNKKILDWNLDKVSTYGIITDQSEGGLRELIMNLIARGFIAMTT
DKFPIIKLKESSRKVLKGEEKILIRKERVKVEDKKKKRVIKNENLNFDDKLFELLANVRK
EIATKKKVPLYVVFHNSALEEMAHYMPLDKESFMNIKGVGERKFKNYGLQFMRAIEEYKT
RQSQEDL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagatataaacttttaaaaaaatattttggttatgatgattttagagaaggtcaa
atagatattattgataatgttttaaatgaaaaagattcacttgtagtcatgccaactggt
ggtggtaaatcattatgttatcaacttccttcattattgaaaagcggaataactatagta
atttcaccgcttattgcattaatgaaagatcaagtagatggattaaatgaaattggtata
aattctacttttttgaatagtactttaacaagtatagaaacaaataatagaatttcgggt
attatagatggagcatataaacttgtatatgttgctcctgaaagattactctctgaagat
tttataagacttaatgaaaaaataaatattgatattgtagcagttgatgaagctcactgt
ataagtcagtggggtcacgattttagacctagttatagaaatatacctctctttatttct
agactaaaaaaaaggccaactattgttgcattaactgcaacggctactaaacttgttata
gaggaaataaagaataatcttaaattacaaaatccttttgaactaactacaggatttgat
agaaaaaatcttttttataaagttgtaaagccaaatgatagatataaatatgttaaagaa
tatttaactaaagaatttaaggaaggttctgcaattatttactgttcaacaagaaaaact
gttgaatcgttaagtaaaaaactttttgaaagtgggttttcggtttctgcctaccatgca
gggattgatactgaaaaaaggaatagaattcaagatgcatttatgctagatgaaataaaa
attatcgttgcaacaaatgcttttggtatgggaattgacaaacctgatgtaagagctgtt
atacattacaatatgcctaaaaatatggaagcatattatcaagaagcaggtcgtgctggt
agagacggtaaaaaaagtgattgtattttaatgtattcaccttctgatatagttaaacaa
agattaatgattgctcaaaatgcaaatgatttaagtagagaacaaatttctcttaaaaat
ctacagtatttagttagttattgtcatacaaatgactgccttaggaatgagattacaaga
tattttggagaagaatctgtgactaataactgcgaaaattgtggaaactgtttgtgtgac
tcagaattcgtagatatgacactagaatcacaaaaaatattatcgtgcatatatagaacc
aatcaaagatttggagtaaatgtaataatacaagtacttagaggatcaaaaaataagaaa
atattagattggaatttagataaagtatccacgtatggaataattacagatcagtctgaa
ggcggacttcgtgaacttataatgaatttaattgctagaggttttatagcaatgacgaca
gataagtttccaataataaaattaaaagaaagctcaagaaaagtattaaaaggtgaagaa
aaaattctaataagaaaagagagagtaaaagtagaagataaaaagaaaaaacgtgtaatt
aaaaatgaaaacttaaactttgatgataaattatttgaacttttagcaaatgtaagaaaa
gaaatagcaacaaaaaagaaagttcctctatatgttgttttccataatagtgcgcttgaa
gaaatggcacattatatgccacttgataaagaaagttttatgaatataaaaggtgtaggt
gagagaaaatttaaaaattatggattacagtttatgagagcgatagaggaatataagact
agacaaagtcaagaggatctgtaa
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