Helicovermis profundi: HLPR_16580
Help
Entry
HLPR_16580 CDS
T09891
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hprf
Helicovermis profundi
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hprf03016
]
HLPR_16580 (truB)
Enzymes [BR:
hprf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HLPR_16580 (truB)
Transfer RNA biogenesis [BR:
hprf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HLPR_16580 (truB)
Prokaryotic type
HLPR_16580 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BEP29327
UniProt:
A0AAU9EF18
LinkDB
All DBs
Position
complement(1890922..1891833)
Genome browser
AA seq
303 aa
AA seq
DB search
MKDGVINFYKPQNMTSHDVVAIVRKKLKIKRVGHTGTLDPMAEGVLPICIGRATKIAEYL
VQDKKKYRCEISLGITTDTQDKWGKELIKRDVNVTSVEMTSCIKSFIGEIEQIPPMYSAL
KHKGKKLYELAREGITVERKPRKRTIFNIDIISIDEKTASFDVECSKGTYIRTLCYDIGE
KLGCGAHMSALTRISSGNFTIENVVTIEAFKEMTYEQIDKLIVTADNAVSNFKKIYIKNE
VLKQVLNGVKFNLLDFQINNNENSKYIESEKVLVYDSKKFLGIANYRLSDNSLKMDKLFF
IGD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatggagtaatcaatttttataaaccacaaaatatgacatctcatgatgttgta
gcaatagtaagaaaaaaattaaaaattaagcgagtaggtcatacaggaacactagatcct
atggctgagggtgttcttcccatatgtattggtagagcaactaaaattgctgaatattta
gttcaagataagaaaaaatataggtgcgaaatttcgcttggaattacaacggatactcag
gataaatggggtaaagaattaataaaaagagatgttaatgttacatctgttgaaatgact
tcttgcatcaaaagttttattggtgagattgagcaaataccaccaatgtactctgcttta
aagcataaaggtaaaaaactttatgaattagctagagagggaataactgttgaaaggaaa
cctagaaagcgcacaatatttaatattgatattataagtattgatgaaaaaacagcaagt
tttgatgttgaatgttcaaaaggaacttatattcgtactttatgttatgatattggtgaa
aaacttggatgtggagctcatatgtcggctcttacaaggatttctagtggtaattttact
attgaaaatgtagtgactattgaagcttttaaagaaatgacatatgaacaaatagataaa
ttaattgttactgcagataatgcagtttctaattttaaaaaaatttatattaaaaatgaa
gtgttaaaacaggtactaaatggcgtaaaatttaatttgctagattttcagataaataat
aatgaaaattcaaagtatattgagtcagaaaaagttcttgtttacgattcaaagaaattt
ctaggaattgcaaactaccgtttaagcgataatagtttaaaaatggataaactttttttt
ataggtgactaa
DBGET
integrated database retrieval system
