Helicovermis profundi: HLPR_18110
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Entry
HLPR_18110 CDS
T09891
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hprf
Helicovermis profundi
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hprf03009
]
HLPR_18110
Enzymes [BR:
hprf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HLPR_18110
Ribosome biogenesis [BR:
hprf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HLPR_18110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Ribosomal_L19e
KDM5_C-hel
MOV-10_Ig-like
Motif
Other DBs
NCBI-ProteinID:
BEP29480
UniProt:
A0AAU9EWK7
LinkDB
All DBs
Position
complement(2042605..2043561)
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AA seq
318 aa
AA seq
DB search
MFDINNIIDQFEFIIDTENEGKRLDVFLTKILDGYSRNYIQKLIKDGYINVNSKVVTTKK
YAIKENDTVEIFIPKPVNLDVEAEDIFVEIVYEDDDVIIVNKPQGMVVHPAPGNYSGTLV
NALLFHAKSLSNINGVVRPGIVHRIDKDTSGLLMIAKNNKSHNSLAAQLKDHSSTRKYIA
IVHGNIVEDQGTIDKPIARNPKNRLKMAVVEGGRESVTHYKVLKRYQTFTLVECQLETGR
THQIRVHMSYINHPLLGDNLYGPKNSKIKYSGQALHAKTLGFVHPTTNKYIEFNSELPEY
FVELIKKIEAINKIRNKE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacataaataacataattgatcaatttgaatttataatagacacagaaaatgaa
ggtaaaagattagatgtttttttaacaaaaatattagatggatattcaaggaattatatt
caaaaacttataaaagacggatatattaatgttaatagtaaagtagtaactacaaaaaaa
tatgcaattaaagaaaatgatacagttgaaatttttataccaaagccagtaaatcttgat
gtagaagctgaagatatttttgttgaaattgtatatgaagatgacgatgtaattattgta
aacaaacctcaaggtatggttgttcatccagcaccaggcaattacagtggaactttagtg
aatgctcttttatttcatgcaaaaagtttatcaaatattaacggagttgtaagacctggc
attgttcatagaattgataaggatacttcaggtcttctaatgatagcgaaaaataataaa
agtcataatagtctcgcggctcagttaaaggatcactcttctacaagaaagtatattgct
attgttcatggaaatatagttgaagaccaaggtacaattgataaaccaattgcaagaaat
ccgaaaaacagacttaagatggctgttgttgaaggtggaagagaatcagtaacccattac
aaagttttaaaaagatatcaaacttttactttagtagaatgccaacttgaaacaggtagg
acacatcaaattagagttcatatgagttatataaatcatcctcttcttggcgataatcta
tatggtccgaaaaattctaaaatcaagtatagtggacaagcgcttcatgctaaaacccta
ggttttgttcatccaactacaaataaatatattgaatttaattcagagctacctgagtat
tttgtagaattaataaaaaagattgaagcaatcaataaaatacgtaataaagagtga
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